Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdkn2bP55271 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdkn2bP55271 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Gm23547-201ENSMUST00000158210 271 ntBASIC14.52□□□□□ -0.09
Cdkn2bP55271 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdkn2bP55271 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Cdkn2bP55271 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.51□□□□□ -0.09
Cdkn2bP55271 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.51□□□□□ -0.09
Cdkn2bP55271 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.51□□□□□ -0.09
Cdkn2bP55271 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.51□□□□□ -0.09
Cdkn2bP55271 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.51□□□□□ -0.09
Cdkn2bP55271 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdkn2bP55271 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.5□□□□□ -0.09
Cdkn2bP55271 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.5□□□□□ -0.09
Cdkn2bP55271 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Gm8097-201ENSMUST00000117903 829 ntBASIC14.5□□□□□ -0.09
Cdkn2bP55271 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdkn2bP55271 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Cdkn2bP55271 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms