Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-1P50220 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx2-1P50220 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.58□□□□□ -0.4
Nkx2-1P50220 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.58□□□□□ -0.4
Nkx2-1P50220 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Nkx2-1P50220 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Nkx2-1P50220 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.57□□□□□ -0.4
Nkx2-1P50220 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.57□□□□□ -0.4
Nkx2-1P50220 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Nkx2-1P50220 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Nkx2-1P50220 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.56□□□□□ -0.4
Nkx2-1P50220 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-1P50220 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Gm37722-201ENSMUST00000193757 208 ntBASIC12.56□□□□□ -0.4
Nkx2-1P50220 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Nkx2-1P50220 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Nkx2-1P50220 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Nkx2-1P50220 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms