Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
GdnfP48540 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.29□□□□□ -0.28
GdnfP48540 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
GdnfP48540 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
GdnfP48540 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GdnfP48540 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.29□□□□□ -0.28
GdnfP48540 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GdnfP48540 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GdnfP48540 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GdnfP48540 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.29□□□□□ -0.28
GdnfP48540 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.28□□□□□ -0.28
GdnfP48540 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.28□□□□□ -0.28
GdnfP48540 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.28□□□□□ -0.28
GdnfP48540 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.28□□□□□ -0.28
GdnfP48540 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.28□□□□□ -0.28
GdnfP48540 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.28□□□□□ -0.28
GdnfP48540 Mir3081-201ENSMUST00000175305 84 ntBASIC13.28□□□□□ -0.28
GdnfP48540 Ank2-226ENSMUST00000189368 339 ntBASIC13.28□□□□□ -0.28
GdnfP48540 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.28□□□□□ -0.28
GdnfP48540 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
GdnfP48540 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.28□□□□□ -0.28
GdnfP48540 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.28□□□□□ -0.28
GdnfP48540 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GdnfP48540 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.27□□□□□ -0.28
GdnfP48540 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.27□□□□□ -0.28
GdnfP48540 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
GdnfP48540 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.27□□□□□ -0.28
GdnfP48540 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GdnfP48540 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.27□□□□□ -0.28
GdnfP48540 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GdnfP48540 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GdnfP48540 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GdnfP48540 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GdnfP48540 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
GdnfP48540 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.27□□□□□ -0.29
GdnfP48540 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.27□□□□□ -0.29
GdnfP48540 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GdnfP48540 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.27□□□□□ -0.29
GdnfP48540 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
GdnfP48540 Gm27357-201ENSMUST00000183754 135 ntBASIC13.27□□□□□ -0.29
GdnfP48540 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.27□□□□□ -0.29
GdnfP48540 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GdnfP48540 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
GdnfP48540 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
GdnfP48540 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.27□□□□□ -0.29
GdnfP48540 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
GdnfP48540 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GdnfP48540 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GdnfP48540 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GdnfP48540 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GdnfP48540 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GdnfP48540 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.27□□□□□ -0.29
GdnfP48540 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
GdnfP48540 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
GdnfP48540 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
GdnfP48540 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.26□□□□□ -0.29
GdnfP48540 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
GdnfP48540 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
GdnfP48540 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.26□□□□□ -0.29
GdnfP48540 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
GdnfP48540 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms