Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Gm6736-201ENSMUST00000166583 948 ntBASIC12.64□□□□□ -0.39
Col8a2P25318 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.64□□□□□ -0.39
Col8a2P25318 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.64□□□□□ -0.39
Col8a2P25318 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.64□□□□□ -0.39
Col8a2P25318 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Col8a2P25318 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Col8a2P25318 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Col8a2P25318 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Col8a2P25318 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col8a2P25318 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.63□□□□□ -0.39
Col8a2P25318 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col8a2P25318 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.63□□□□□ -0.39
Col8a2P25318 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Col8a2P25318 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.63□□□□□ -0.39
Col8a2P25318 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col8a2P25318 Gm17271-201ENSMUST00000165535 355 ntBASIC12.63□□□□□ -0.39
Col8a2P25318 Gm27301-201ENSMUST00000184012 127 ntBASIC12.63□□□□□ -0.39
Col8a2P25318 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.63□□□□□ -0.39
Col8a2P25318 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.63□□□□□ -0.39
Col8a2P25318 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.63□□□□□ -0.39
Col8a2P25318 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col8a2P25318 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Col8a2P25318 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col8a2P25318 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.62□□□□□ -0.39
Col8a2P25318 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.62□□□□□ -0.39
Col8a2P25318 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.62□□□□□ -0.39
Col8a2P25318 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col8a2P25318 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.62□□□□□ -0.39
Col8a2P25318 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Gm12008-201ENSMUST00000117791 755 ntBASIC12.62□□□□□ -0.39
Col8a2P25318 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.62□□□□□ -0.39
Col8a2P25318 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col8a2P25318 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Col8a2P25318 Thap2-203ENSMUST00000218989 527 ntBASIC12.62□□□□□ -0.39
Col8a2P25318 Chchd1-203ENSMUST00000224633 557 ntBASIC12.62□□□□□ -0.39
Col8a2P25318 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Col8a2P25318 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Col8a2P25318 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col8a2P25318 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms