Protein–RNA interactions for Protein: P02340

Tp53, Cellular tumor antigen p53, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tp53P02340 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Gm13597-201ENSMUST00000121239 375 ntBASIC16.35■□□□□ 0.21
Tp53P02340 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.35■□□□□ 0.21
Tp53P02340 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.35■□□□□ 0.21
Tp53P02340 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.35■□□□□ 0.21
Tp53P02340 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.35■□□□□ 0.21
Tp53P02340 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.35■□□□□ 0.21
Tp53P02340 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Tp53P02340 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.35■□□□□ 0.21
Tp53P02340 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Tp53P02340 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Tp53P02340 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tp53P02340 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tp53P02340 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Tp53P02340 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tp53P02340 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.34■□□□□ 0.21
Tp53P02340 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tp53P02340 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tp53P02340 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tp53P02340 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tp53P02340 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tp53P02340 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.34■□□□□ 0.21
Tp53P02340 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.34■□□□□ 0.21
Tp53P02340 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Tp53P02340 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tp53P02340 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.34■□□□□ 0.21
Tp53P02340 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Tp53P02340 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.34■□□□□ 0.21
Tp53P02340 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.34■□□□□ 0.21
Tp53P02340 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tp53P02340 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Tp53P02340 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Tp53P02340 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Tp53P02340 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tp53P02340 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.34■□□□□ 0.21
Tp53P02340 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tp53P02340 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Tp53P02340 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Tp53P02340 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tp53P02340 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tp53P02340 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Tp53P02340 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Tp53P02340 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tp53P02340 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tp53P02340 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Tp53P02340 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Tp53P02340 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Tp53P02340 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
Tp53P02340 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.33■□□□□ 0.2
Tp53P02340 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Tp53P02340 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.33■□□□□ 0.2
Tp53P02340 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.33■□□□□ 0.2
Tp53P02340 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Tp53P02340 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.33■□□□□ 0.2
Tp53P02340 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.33■□□□□ 0.2
Tp53P02340 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Tp53P02340 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.33■□□□□ 0.2
Tp53P02340 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Tp53P02340 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms