Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Per1O35973 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Per1O35973 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.37■□□□□ 0.21
Per1O35973 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Per1O35973 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.37■□□□□ 0.21
Per1O35973 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.37■□□□□ 0.21
Per1O35973 Mir6990-201ENSMUST00000183724 91 ntBASIC16.37■□□□□ 0.21
Per1O35973 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.37■□□□□ 0.21
Per1O35973 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.37■□□□□ 0.21
Per1O35973 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.37■□□□□ 0.21
Per1O35973 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.37■□□□□ 0.21
Per1O35973 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Per1O35973 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Per1O35973 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.37■□□□□ 0.21
Per1O35973 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Per1O35973 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
Per1O35973 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.37■□□□□ 0.21
Per1O35973 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
Per1O35973 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Per1O35973 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Per1O35973 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Per1O35973 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.37■□□□□ 0.21
Per1O35973 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Per1O35973 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Per1O35973 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.36■□□□□ 0.21
Per1O35973 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.36■□□□□ 0.21
Per1O35973 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.36■□□□□ 0.21
Per1O35973 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.36■□□□□ 0.21
Per1O35973 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.36■□□□□ 0.21
Per1O35973 Gm15483-201ENSMUST00000120338 456 ntBASIC16.36■□□□□ 0.21
Per1O35973 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.36■□□□□ 0.21
Per1O35973 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.36■□□□□ 0.21
Per1O35973 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Per1O35973 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Per1O35973 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.35■□□□□ 0.21
Per1O35973 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Per1O35973 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Per1O35973 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.35■□□□□ 0.21
Per1O35973 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Per1O35973 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Gm44335-201ENSMUST00000196879 141 ntBASIC16.35■□□□□ 0.21
Per1O35973 Gm44297-201ENSMUST00000198304 141 ntBASIC16.35■□□□□ 0.21
Per1O35973 Gm44346-201ENSMUST00000198851 141 ntBASIC16.35■□□□□ 0.21
Per1O35973 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.35■□□□□ 0.21
Per1O35973 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Per1O35973 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Per1O35973 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.35■□□□□ 0.21
Per1O35973 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.35■□□□□ 0.21
Per1O35973 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Per1O35973 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Per1O35973 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms