Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.99□□□□□ -0.49
Efnb3O35393 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Efnb3O35393 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Efnb3O35393 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.99□□□□□ -0.49
Efnb3O35393 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.99□□□□□ -0.49
Efnb3O35393 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Efnb3O35393 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.99□□□□□ -0.49
Efnb3O35393 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.99□□□□□ -0.49
Efnb3O35393 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Efnb3O35393 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Efnb3O35393 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Efnb3O35393 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Efnb3O35393 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Efnb3O35393 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Efnb3O35393 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.98□□□□□ -0.49
Efnb3O35393 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Efnb3O35393 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Efnb3O35393 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Efnb3O35393 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.98□□□□□ -0.49
Efnb3O35393 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Efnb3O35393 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.98□□□□□ -0.49
Efnb3O35393 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Efnb3O35393 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Efnb3O35393 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
Efnb3O35393 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Gm25406-201ENSMUST00000157599 105 ntBASIC11.97□□□□□ -0.49
Efnb3O35393 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC11.97□□□□□ -0.49
Efnb3O35393 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.97□□□□□ -0.49
Efnb3O35393 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Efnb3O35393 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Efnb3O35393 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms