Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk1aQ9D132 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.39□□□□□ -0.11
Upk1aQ9D132 Gm6659-201ENSMUST00000174752 547 ntBASIC14.39□□□□□ -0.11
Upk1aQ9D132 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.39□□□□□ -0.11
Upk1aQ9D132 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.39□□□□□ -0.11
Upk1aQ9D132 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Gm19164-201ENSMUST00000210667 640 ntBASIC14.39□□□□□ -0.11
Upk1aQ9D132 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Upk1aQ9D132 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.39□□□□□ -0.11
Upk1aQ9D132 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1aQ9D132 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.38□□□□□ -0.11
Upk1aQ9D132 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.38□□□□□ -0.11
Upk1aQ9D132 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1aQ9D132 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms