Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gm11025-201ENSMUST00000140773 466 ntBASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Gm10154-201ENSMUST00000084445 354 ntBASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.31■□□□□ 0.04
Lsm7Q9CQQ8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Prob1-201ENSMUST00000097619 3021 ntBASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lsm7Q9CQQ8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Chchd1-203ENSMUST00000224633 557 ntBASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm7Q9CQQ8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Sybu-209ENSMUST00000228639 4113 ntBASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Gm16198-201ENSMUST00000118766 670 ntBASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.28■□□□□ 0.04
Lsm7Q9CQQ8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms