Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nipsnap3bQ9CQE1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Gm8344-201ENSMUST00000119813 856 ntBASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Gm12497-201ENSMUST00000138778 237 ntBASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nipsnap3bQ9CQE1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Gm14722-201ENSMUST00000118943 689 ntBASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nipsnap3bQ9CQE1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Nipsnap3bQ9CQE1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nipsnap3bQ9CQE1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Nipsnap3bQ9CQE1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Nipsnap3bQ9CQE1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Nipsnap3bQ9CQE1 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nipsnap3bQ9CQE1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms