Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHOX2BQ99453 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHOX2BQ99453 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.27■□□□□ 0.52
PHOX2BQ99453 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
PHOX2BQ99453 MEIS3P1-201ENST00000495167 958 ntBASIC18.27■□□□□ 0.52
PHOX2BQ99453 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.27■□□□□ 0.52
PHOX2BQ99453 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHOX2BQ99453 AC069262.1-201ENST00000539058 672 ntBASIC18.27■□□□□ 0.52
PHOX2BQ99453 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PHOX2BQ99453 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.27■□□□□ 0.52
PHOX2BQ99453 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.27■□□□□ 0.52
PHOX2BQ99453 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.27■□□□□ 0.52
PHOX2BQ99453 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PHOX2BQ99453 AC092865.6-201ENST00000642101 219 ntBASIC18.27■□□□□ 0.52
PHOX2BQ99453 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHOX2BQ99453 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PHOX2BQ99453 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHOX2BQ99453 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHOX2BQ99453 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PHOX2BQ99453 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHOX2BQ99453 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHOX2BQ99453 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHOX2BQ99453 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHOX2BQ99453 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.51
PHOX2BQ99453 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PHOX2BQ99453 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.27■□□□□ 0.51
PHOX2BQ99453 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PHOX2BQ99453 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 AP001271.2-201ENST00000624018 1556 ntBASIC18.26■□□□□ 0.51
PHOX2BQ99453 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHOX2BQ99453 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHOX2BQ99453 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHOX2BQ99453 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PHOX2BQ99453 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PHOX2BQ99453 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHOX2BQ99453 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHOX2BQ99453 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PHOX2BQ99453 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 AL078644.1-201ENST00000609881 752 ntBASIC18.26■□□□□ 0.51
PHOX2BQ99453 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHOX2BQ99453 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.26■□□□□ 0.51
PHOX2BQ99453 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHOX2BQ99453 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PHOX2BQ99453 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHOX2BQ99453 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.25■□□□□ 0.51
PHOX2BQ99453 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHOX2BQ99453 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHOX2BQ99453 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHOX2BQ99453 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.25■□□□□ 0.51
PHOX2BQ99453 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.25■□□□□ 0.51
PHOX2BQ99453 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.25■□□□□ 0.51
PHOX2BQ99453 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PHOX2BQ99453 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHOX2BQ99453 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.25■□□□□ 0.51
PHOX2BQ99453 TSEN15P1-201ENST00000423257 515 ntBASIC18.25■□□□□ 0.51
PHOX2BQ99453 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.25■□□□□ 0.51
PHOX2BQ99453 PRSS29P-201ENST00000440800 595 ntBASIC18.25■□□□□ 0.51
PHOX2BQ99453 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHOX2BQ99453 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.25■□□□□ 0.51
PHOX2BQ99453 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHOX2BQ99453 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
PHOX2BQ99453 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHOX2BQ99453 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHOX2BQ99453 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.25■□□□□ 0.51
PHOX2BQ99453 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHOX2BQ99453 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
PHOX2BQ99453 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHOX2BQ99453 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.24■□□□□ 0.51
PHOX2BQ99453 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHOX2BQ99453 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.24■□□□□ 0.51
PHOX2BQ99453 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHOX2BQ99453 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHOX2BQ99453 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHOX2BQ99453 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.24■□□□□ 0.51
PHOX2BQ99453 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.24■□□□□ 0.51
PHOX2BQ99453 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.24■□□□□ 0.51
PHOX2BQ99453 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.24■□□□□ 0.51
PHOX2BQ99453 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.24■□□□□ 0.51
PHOX2BQ99453 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.24■□□□□ 0.51
PHOX2BQ99453 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PHOX2BQ99453 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.24■□□□□ 0.51
PHOX2BQ99453 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.24■□□□□ 0.51
PHOX2BQ99453 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHOX2BQ99453 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHOX2BQ99453 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHOX2BQ99453 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.24■□□□□ 0.51
PHOX2BQ99453 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHOX2BQ99453 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms