Protein–RNA interactions for Protein: Q925H1

Trps1, Zinc finger transcription factor Trps1, mousemouse

Predictions only

Length 1,281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1Q925H1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trps1Q925H1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trps1Q925H1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.72■□□□□ 0.11
Trps1Q925H1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trps1Q925H1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trps1Q925H1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trps1Q925H1 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trps1Q925H1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trps1Q925H1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trps1Q925H1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trps1Q925H1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trps1Q925H1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.72■□□□□ 0.11
Trps1Q925H1 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.72■□□□□ 0.11
Trps1Q925H1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.71■□□□□ 0.11
Trps1Q925H1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trps1Q925H1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.71■□□□□ 0.11
Trps1Q925H1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trps1Q925H1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.71■□□□□ 0.11
Trps1Q925H1 Gm43767-201ENSMUST00000198933 381 ntBASIC15.71■□□□□ 0.11
Trps1Q925H1 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.71■□□□□ 0.11
Trps1Q925H1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.71■□□□□ 0.11
Trps1Q925H1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trps1Q925H1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.71■□□□□ 0.11
Trps1Q925H1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trps1Q925H1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trps1Q925H1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trps1Q925H1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trps1Q925H1 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.71■□□□□ 0.1
Trps1Q925H1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trps1Q925H1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trps1Q925H1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.7■□□□□ 0.1
Trps1Q925H1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Trps1Q925H1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.7■□□□□ 0.1
Trps1Q925H1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trps1Q925H1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
Trps1Q925H1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.7■□□□□ 0.1
Trps1Q925H1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trps1Q925H1 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.7■□□□□ 0.1
Trps1Q925H1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trps1Q925H1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Trps1Q925H1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Trps1Q925H1 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Trps1Q925H1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trps1Q925H1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.69■□□□□ 0.1
Trps1Q925H1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trps1Q925H1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms