Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdha3Q91Y16 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdha3Q91Y16 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Grk6-207ENSMUST00000225925 2769 ntBASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Gm27628-201ENSMUST00000184911 107 ntBASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Psmb5-202ENSMUST00000227257 622 ntBASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Pcdha3Q91Y16 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Gm9682-201ENSMUST00000197505 556 ntBASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdha3Q91Y16 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdha3Q91Y16 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdha3Q91Y16 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdha3Q91Y16 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.83■□□□□ 0.13
Pcdha3Q91Y16 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.83■□□□□ 0.13
Pcdha3Q91Y16 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdha3Q91Y16 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdha3Q91Y16 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdha3Q91Y16 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Pcdha3Q91Y16 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Gm14140-201ENSMUST00000119999 995 ntBASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdha3Q91Y16 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms