Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.75□□□□□ -0.37
Rif1Q6PR54 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.75□□□□□ -0.37
Rif1Q6PR54 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.75□□□□□ -0.37
Rif1Q6PR54 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rif1Q6PR54 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rif1Q6PR54 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Gm37986-201ENSMUST00000193285 383 ntBASIC12.74□□□□□ -0.37
Rif1Q6PR54 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.74□□□□□ -0.37
Rif1Q6PR54 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rif1Q6PR54 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rif1Q6PR54 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Gm19164-201ENSMUST00000210667 640 ntBASIC12.73□□□□□ -0.37
Rif1Q6PR54 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.73□□□□□ -0.37
Rif1Q6PR54 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.73□□□□□ -0.37
Rif1Q6PR54 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.73□□□□□ -0.37
Rif1Q6PR54 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.73□□□□□ -0.37
Rif1Q6PR54 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rif1Q6PR54 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rif1Q6PR54 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.72□□□□□ -0.37
Rif1Q6PR54 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rif1Q6PR54 Gm9719-201ENSMUST00000162765 543 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms