Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Clns1aQ61189 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.01□□□□□ -0.33
Clns1aQ61189 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.01□□□□□ -0.33
Clns1aQ61189 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clns1aQ61189 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13□□□□□ -0.33
Clns1aQ61189 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Clns1aQ61189 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13□□□□□ -0.33
Clns1aQ61189 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13□□□□□ -0.33
Clns1aQ61189 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Clns1aQ61189 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Clns1aQ61189 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Clns1aQ61189 Mir5122-201ENSMUST00000175004 89 ntBASIC13□□□□□ -0.33
Clns1aQ61189 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Clns1aQ61189 Mir1668-201ENSMUST00000184114 107 ntBASIC13□□□□□ -0.33
Clns1aQ61189 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13□□□□□ -0.33
Clns1aQ61189 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 AC114585.2-202ENSMUST00000228094 426 ntBASIC13□□□□□ -0.33
Clns1aQ61189 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Clns1aQ61189 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Clns1aQ61189 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Clns1aQ61189 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Clns1aQ61189 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Clns1aQ61189 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.99□□□□□ -0.33
Clns1aQ61189 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.99□□□□□ -0.33
Clns1aQ61189 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.99□□□□□ -0.33
Clns1aQ61189 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.99□□□□□ -0.33
Clns1aQ61189 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.99□□□□□ -0.33
Clns1aQ61189 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Clns1aQ61189 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Clns1aQ61189 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Clns1aQ61189 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.99□□□□□ -0.33
Clns1aQ61189 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.99□□□□□ -0.33
Clns1aQ61189 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.99□□□□□ -0.33
Clns1aQ61189 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clns1aQ61189 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms