Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.58□□□□□ -0.08
ClpbQ60649 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpbQ60649 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpbQ60649 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.58□□□□□ -0.08
ClpbQ60649 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.58□□□□□ -0.08
ClpbQ60649 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpbQ60649 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpbQ60649 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpbQ60649 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ClpbQ60649 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpbQ60649 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpbQ60649 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ClpbQ60649 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ClpbQ60649 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ClpbQ60649 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.58□□□□□ -0.08
ClpbQ60649 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ClpbQ60649 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.57□□□□□ -0.08
ClpbQ60649 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.57□□□□□ -0.08
ClpbQ60649 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.57□□□□□ -0.08
ClpbQ60649 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.57□□□□□ -0.08
ClpbQ60649 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.57□□□□□ -0.08
ClpbQ60649 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.57□□□□□ -0.08
ClpbQ60649 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ClpbQ60649 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ClpbQ60649 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ClpbQ60649 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.57□□□□□ -0.08
ClpbQ60649 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ClpbQ60649 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.57□□□□□ -0.08
ClpbQ60649 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ClpbQ60649 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ClpbQ60649 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ClpbQ60649 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Gm13036-201ENSMUST00000117799 748 ntBASIC14.56□□□□□ -0.08
ClpbQ60649 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.56□□□□□ -0.08
ClpbQ60649 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.56□□□□□ -0.08
ClpbQ60649 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.56□□□□□ -0.08
ClpbQ60649 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.56□□□□□ -0.08
ClpbQ60649 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.56□□□□□ -0.08
ClpbQ60649 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ClpbQ60649 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ClpbQ60649 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.56□□□□□ -0.08
ClpbQ60649 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ClpbQ60649 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.55□□□□□ -0.08
ClpbQ60649 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpbQ60649 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpbQ60649 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpbQ60649 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.55□□□□□ -0.08
ClpbQ60649 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpbQ60649 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpbQ60649 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ClpbQ60649 Gm15358-201ENSMUST00000119249 520 ntBASIC14.55□□□□□ -0.08
ClpbQ60649 Gm11764-201ENSMUST00000120221 623 ntBASIC14.55□□□□□ -0.08
ClpbQ60649 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.55□□□□□ -0.08
ClpbQ60649 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ClpbQ60649 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.55□□□□□ -0.08
ClpbQ60649 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.55□□□□□ -0.08
ClpbQ60649 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.55□□□□□ -0.08
ClpbQ60649 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpbQ60649 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
ClpbQ60649 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ClpbQ60649 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpbQ60649 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ClpbQ60649 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpbQ60649 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ClpbQ60649 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpbQ60649 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ClpbQ60649 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ClpbQ60649 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ClpbQ60649 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.55□□□□□ -0.08
ClpbQ60649 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms