Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn2bQ56A07 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scn2bQ56A07 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn2bQ56A07 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn2bQ56A07 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.02■□□□□ -0
Scn2bQ56A07 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn2bQ56A07 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Scn2bQ56A07 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Scn2bQ56A07 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Scn2bQ56A07 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Scn2bQ56A07 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Scn2bQ56A07 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.02■□□□□ -0
Scn2bQ56A07 Gm34391-201ENSMUST00000203706 907 ntBASIC15.02■□□□□ -0
Scn2bQ56A07 Gm7506-201ENSMUST00000207758 815 ntBASIC15.02■□□□□ -0
Scn2bQ56A07 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.02■□□□□ -0
Scn2bQ56A07 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Scn2bQ56A07 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Scn2bQ56A07 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn2bQ56A07 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Scn2bQ56A07 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn2bQ56A07 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn2bQ56A07 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Scn2bQ56A07 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Scn2bQ56A07 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Scn2bQ56A07 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn2bQ56A07 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn2bQ56A07 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn2bQ56A07 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Scn2bQ56A07 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Gm27459-201ENSMUST00000184860 107 ntBASIC15.01□□□□□ -0.01
Scn2bQ56A07 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Gm19164-201ENSMUST00000210667 640 ntBASIC15.01□□□□□ -0.01
Scn2bQ56A07 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
Scn2bQ56A07 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15□□□□□ -0.01
Scn2bQ56A07 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15□□□□□ -0.01
Scn2bQ56A07 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15□□□□□ -0.01
Scn2bQ56A07 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15□□□□□ -0.01
Scn2bQ56A07 Gm45504-201ENSMUST00000211407 2107 ntBASIC15□□□□□ -0.01
Scn2bQ56A07 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15□□□□□ -0.01
Scn2bQ56A07 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15□□□□□ -0.01
Scn2bQ56A07 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Scn2bQ56A07 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15□□□□□ -0.01
Scn2bQ56A07 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15□□□□□ -0.01
Scn2bQ56A07 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.99□□□□□ -0.01
Scn2bQ56A07 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Gm4459-201ENSMUST00000118750 468 ntBASIC14.99□□□□□ -0.01
Scn2bQ56A07 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.99□□□□□ -0.01
Scn2bQ56A07 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.99□□□□□ -0.01
Scn2bQ56A07 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms