Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Snx27Q3UHD6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Snx27Q3UHD6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Snx27Q3UHD6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Snx27Q3UHD6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Snx27Q3UHD6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.33■□□□□ 0.21
Snx27Q3UHD6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Snx27Q3UHD6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Snx27Q3UHD6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Snx27Q3UHD6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Snx27Q3UHD6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm22065-201ENSMUST00000103753 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm22066-201ENSMUST00000103761 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm24932-201ENSMUST00000103763 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm24115-201ENSMUST00000103799 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm22190-201ENSMUST00000103827 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm22191-201ENSMUST00000103831 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm24721-201ENSMUST00000103849 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm28018-201ENSMUST00000103869 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm26399-201ENSMUST00000103937 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm15483-201ENSMUST00000120338 456 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm25349-201ENSMUST00000177728 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm23616-201ENSMUST00000177797 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm25871-201ENSMUST00000177816 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm24752-201ENSMUST00000178240 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm24496-201ENSMUST00000178287 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm25649-201ENSMUST00000178476 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm25548-201ENSMUST00000178681 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm23147-201ENSMUST00000178841 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm26095-201ENSMUST00000179270 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm22171-201ENSMUST00000179283 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm23936-201ENSMUST00000179354 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm22619-201ENSMUST00000179516 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm25255-201ENSMUST00000179579 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm24755-201ENSMUST00000179691 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm26506-201ENSMUST00000179692 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm25086-201ENSMUST00000179931 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm23243-201ENSMUST00000180047 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm24659-201ENSMUST00000180212 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm24169-201ENSMUST00000180244 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm23689-201ENSMUST00000180354 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm27359-201ENSMUST00000184153 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm27785-201ENSMUST00000184268 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm27466-201ENSMUST00000184396 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gm27703-201ENSMUST00000184836 110 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Snx27Q3UHD6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms