Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Col1a2Q01149 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.9■□□□□ 0.62
Col1a2Q01149 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.9■□□□□ 0.62
Col1a2Q01149 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Col1a2Q01149 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 AC164565.1-201ENSMUST00000217520 1484 ntBASIC18.9■□□□□ 0.62
Col1a2Q01149 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
Col1a2Q01149 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Col1a2Q01149 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.9■□□□□ 0.62
Col1a2Q01149 Gm13223-201ENSMUST00000118609 747 ntBASIC18.9■□□□□ 0.62
Col1a2Q01149 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.9■□□□□ 0.62
Col1a2Q01149 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Col1a2Q01149 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Col1a2Q01149 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Col1a2Q01149 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Col1a2Q01149 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col1a2Q01149 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col1a2Q01149 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Col1a2Q01149 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col1a2Q01149 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col1a2Q01149 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col1a2Q01149 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col1a2Q01149 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col1a2Q01149 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col1a2Q01149 Gm14057-201ENSMUST00000120631 482 ntBASIC18.89■□□□□ 0.61
Col1a2Q01149 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col1a2Q01149 Gm27618-201ENSMUST00000183671 60 ntBASIC18.89■□□□□ 0.61
Col1a2Q01149 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.89■□□□□ 0.61
Col1a2Q01149 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Col1a2Q01149 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col1a2Q01149 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.89■□□□□ 0.61
Col1a2Q01149 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col1a2Q01149 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.89■□□□□ 0.61
Col1a2Q01149 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col1a2Q01149 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col1a2Q01149 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col1a2Q01149 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.88■□□□□ 0.61
Col1a2Q01149 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col1a2Q01149 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col1a2Q01149 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col1a2Q01149 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col1a2Q01149 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col1a2Q01149 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col1a2Q01149 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col1a2Q01149 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col1a2Q01149 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.87■□□□□ 0.61
Col1a2Q01149 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.87■□□□□ 0.61
Col1a2Q01149 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Gm38294-201ENSMUST00000192831 381 ntBASIC18.87■□□□□ 0.61
Col1a2Q01149 Gm18049-201ENSMUST00000208909 581 ntBASIC18.87■□□□□ 0.61
Col1a2Q01149 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Col1a2Q01149 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Col1a2Q01149 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Col1a2Q01149 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col1a2Q01149 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.87■□□□□ 0.61
Col1a2Q01149 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Col1a2Q01149 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Col1a2Q01149 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Col1a2Q01149 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.86■□□□□ 0.61
Col1a2Q01149 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.86■□□□□ 0.61
Col1a2Q01149 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col1a2Q01149 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col1a2Q01149 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col1a2Q01149 Gm13464-201ENSMUST00000119418 935 ntBASIC18.86■□□□□ 0.61
Col1a2Q01149 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Col1a2Q01149 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.86■□□□□ 0.61
Col1a2Q01149 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.86■□□□□ 0.61
Col1a2Q01149 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col1a2Q01149 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col1a2Q01149 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col1a2Q01149 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col1a2Q01149 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col1a2Q01149 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col1a2Q01149 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.86■□□□□ 0.61
Col1a2Q01149 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col1a2Q01149 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms