Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.29□□□□□ -0.44
Sssca1P56873 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Sssca1P56873 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sssca1P56873 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sssca1P56873 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Sssca1P56873 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Sssca1P56873 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sssca1P56873 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Sssca1P56873 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Sssca1P56873 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.28□□□□□ -0.44
Sssca1P56873 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Sssca1P56873 Gm11950-201ENSMUST00000121615 838 ntBASIC12.28□□□□□ -0.44
Sssca1P56873 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.28□□□□□ -0.44
Sssca1P56873 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Sssca1P56873 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.28□□□□□ -0.44
Sssca1P56873 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.28□□□□□ -0.44
Sssca1P56873 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sssca1P56873 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sssca1P56873 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sssca1P56873 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sssca1P56873 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sssca1P56873 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sssca1P56873 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sssca1P56873 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
Sssca1P56873 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sssca1P56873 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sssca1P56873 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Sssca1P56873 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sssca1P56873 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.27□□□□□ -0.45
Sssca1P56873 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.27□□□□□ -0.45
Sssca1P56873 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.27□□□□□ -0.45
Sssca1P56873 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sssca1P56873 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.27□□□□□ -0.45
Sssca1P56873 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Sssca1P56873 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Sssca1P56873 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Sssca1P56873 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sssca1P56873 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sssca1P56873 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sssca1P56873 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.26□□□□□ -0.45
Sssca1P56873 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Sssca1P56873 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sssca1P56873 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms