Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.25□□□□□ -0.13
Sox2P48432 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Sox2P48432 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Sox2P48432 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Sox2P48432 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Sox2P48432 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
Sox2P48432 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.25□□□□□ -0.13
Sox2P48432 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.25□□□□□ -0.13
Sox2P48432 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Sox2P48432 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sox2P48432 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox2P48432 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Sox2P48432 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sox2P48432 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.24□□□□□ -0.13
Sox2P48432 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Sox2P48432 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm6433-201ENSMUST00000118634 875 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm9013-201ENSMUST00000132939 882 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm8825-201ENSMUST00000182565 998 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm4518-201ENSMUST00000182638 718 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.24□□□□□ -0.13
Sox2P48432 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.24□□□□□ -0.13
Sox2P48432 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Sox2P48432 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Sox2P48432 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.24□□□□□ -0.13
Sox2P48432 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.24□□□□□ -0.13
Sox2P48432 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.24□□□□□ -0.13
Sox2P48432 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.24□□□□□ -0.13
Sox2P48432 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.24□□□□□ -0.13
Sox2P48432 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.24□□□□□ -0.13
Sox2P48432 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox2P48432 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Sox2P48432 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Gm10013-201ENSMUST00000106074 672 ntBASIC14.23□□□□□ -0.13
Sox2P48432 Gm6345-202ENSMUST00000180900 204 ntBASIC14.23□□□□□ -0.13
Sox2P48432 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Sox2P48432 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.23□□□□□ -0.13
Sox2P48432 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sox2P48432 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms