Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.1□□□□□ -0.15
BgnP28653 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.1□□□□□ -0.15
BgnP28653 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
BgnP28653 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
BgnP28653 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
BgnP28653 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
BgnP28653 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
BgnP28653 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
BgnP28653 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.09□□□□□ -0.15
BgnP28653 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Gm20760-201ENSMUST00000179197 648 ntBASIC14.09□□□□□ -0.15
BgnP28653 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.09□□□□□ -0.15
BgnP28653 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Gm5417-201ENSMUST00000079706 384 ntBASIC14.09□□□□□ -0.15
BgnP28653 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
BgnP28653 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
BgnP28653 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BgnP28653 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BgnP28653 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BgnP28653 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
BgnP28653 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
BgnP28653 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BgnP28653 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
BgnP28653 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BgnP28653 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
BgnP28653 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BgnP28653 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
BgnP28653 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BgnP28653 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BgnP28653 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.08□□□□□ -0.16
BgnP28653 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
BgnP28653 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.08□□□□□ -0.16
BgnP28653 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BgnP28653 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.08□□□□□ -0.16
BgnP28653 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.08□□□□□ -0.16
BgnP28653 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.08□□□□□ -0.16
BgnP28653 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
BgnP28653 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BgnP28653 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BgnP28653 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
BgnP28653 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BgnP28653 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
BgnP28653 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BgnP28653 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BgnP28653 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
BgnP28653 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BgnP28653 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BgnP28653 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BgnP28653 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
BgnP28653 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
BgnP28653 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BgnP28653 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BgnP28653 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BgnP28653 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.07□□□□□ -0.16
BgnP28653 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BgnP28653 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.07□□□□□ -0.16
BgnP28653 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BgnP28653 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BgnP28653 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BgnP28653 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BgnP28653 Gm37722-201ENSMUST00000193757 208 ntBASIC14.07□□□□□ -0.16
BgnP28653 Gm30025-201ENSMUST00000218555 728 ntBASIC14.07□□□□□ -0.16
BgnP28653 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.07□□□□□ -0.16
BgnP28653 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BgnP28653 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms