Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fv4P11370 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Fv4P11370 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
Fv4P11370 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Fv4P11370 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Fv4P11370 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.67□□□□□ -0.06
Fv4P11370 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Fv4P11370 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Fv4P11370 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Gm4535-201ENSMUST00000182274 558 ntBASIC14.67□□□□□ -0.06
Fv4P11370 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Gm10355-201ENSMUST00000097146 517 ntBASIC14.67□□□□□ -0.06
Fv4P11370 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.67□□□□□ -0.06
Fv4P11370 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.67□□□□□ -0.06
Fv4P11370 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.67□□□□□ -0.06
Fv4P11370 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fv4P11370 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Fv4P11370 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.66□□□□□ -0.06
Fv4P11370 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Fv4P11370 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Fv4P11370 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.66□□□□□ -0.06
Fv4P11370 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Fv4P11370 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
Fv4P11370 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.66□□□□□ -0.06
Fv4P11370 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Fv4P11370 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.66□□□□□ -0.06
Fv4P11370 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fv4P11370 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Fv4P11370 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.65□□□□□ -0.06
Fv4P11370 Gm10499-201ENSMUST00000174094 934 ntBASIC14.65□□□□□ -0.06
Fv4P11370 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Fv4P11370 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Fv4P11370 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Fv4P11370 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.65□□□□□ -0.06
Fv4P11370 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fv4P11370 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fv4P11370 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Fv4P11370 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fv4P11370 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fv4P11370 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fv4P11370 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Fv4P11370 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.64□□□□□ -0.07
Fv4P11370 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Fv4P11370 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms