Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pde6dO55057 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12□□□□□ -0.49
Pde6dO55057 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Pde6dO55057 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Pde6dO55057 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pde6dO55057 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pde6dO55057 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pde6dO55057 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pde6dO55057 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.99□□□□□ -0.49
Pde6dO55057 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.99□□□□□ -0.49
Pde6dO55057 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.99□□□□□ -0.49
Pde6dO55057 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pde6dO55057 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Pde6dO55057 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Pde6dO55057 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pde6dO55057 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pde6dO55057 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.98□□□□□ -0.49
Pde6dO55057 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pde6dO55057 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.98□□□□□ -0.49
Pde6dO55057 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.98□□□□□ -0.49
Pde6dO55057 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pde6dO55057 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pde6dO55057 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pde6dO55057 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.98□□□□□ -0.49
Pde6dO55057 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pde6dO55057 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Pde6dO55057 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.97□□□□□ -0.49
Pde6dO55057 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.97□□□□□ -0.49
Pde6dO55057 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Gm12008-201ENSMUST00000117791 755 ntBASIC11.97□□□□□ -0.49
Pde6dO55057 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Gm27463-201ENSMUST00000183569 57 ntBASIC11.97□□□□□ -0.49
Pde6dO55057 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.97□□□□□ -0.49
Pde6dO55057 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.97□□□□□ -0.49
Pde6dO55057 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pde6dO55057 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms