Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Kcnu1O54982 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Kcnu1O54982 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Kcnu1O54982 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Kcnu1O54982 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Kcnu1O54982 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Kcnu1O54982 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Kcnu1O54982 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Kcnu1O54982 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.16■□□□□ 0.18
Kcnu1O54982 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.16■□□□□ 0.18
Kcnu1O54982 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Kcnu1O54982 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Kcnu1O54982 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.16■□□□□ 0.18
Kcnu1O54982 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.16■□□□□ 0.18
Kcnu1O54982 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.16■□□□□ 0.18
Kcnu1O54982 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.16■□□□□ 0.18
Kcnu1O54982 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.16■□□□□ 0.18
Kcnu1O54982 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Kcnu1O54982 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Kcnu1O54982 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Kcnu1O54982 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Kcnu1O54982 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Kcnu1O54982 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.15■□□□□ 0.18
Kcnu1O54982 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Kcnu1O54982 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Kcnu1O54982 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Kcnu1O54982 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.15■□□□□ 0.18
Kcnu1O54982 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Kcnu1O54982 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Kcnu1O54982 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Kcnu1O54982 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.14■□□□□ 0.17
Kcnu1O54982 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.14■□□□□ 0.17
Kcnu1O54982 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Kcnu1O54982 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Kcnu1O54982 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.14■□□□□ 0.17
Kcnu1O54982 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Kcnu1O54982 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.14■□□□□ 0.17
Kcnu1O54982 Gm37153-201ENSMUST00000193637 231 ntBASIC16.14■□□□□ 0.17
Kcnu1O54982 Gm9682-201ENSMUST00000197505 556 ntBASIC16.14■□□□□ 0.17
Kcnu1O54982 Gm6376-201ENSMUST00000209407 580 ntBASIC16.14■□□□□ 0.17
Kcnu1O54982 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.14■□□□□ 0.17
Kcnu1O54982 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.14■□□□□ 0.17
Kcnu1O54982 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.14■□□□□ 0.17
Kcnu1O54982 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Kcnu1O54982 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Kcnu1O54982 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Kcnu1O54982 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Kcnu1O54982 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Kcnu1O54982 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Kcnu1O54982 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.13■□□□□ 0.17
Kcnu1O54982 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms