Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL020989.1-201ENST00000422979 469 ntBASIC29.07■■■□□ 2.24
CHD1O14646 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC29.07■■■□□ 2.24
CHD1O14646 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CHD1O14646 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC29.07■■■□□ 2.24
CHD1O14646 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC29.07■■■□□ 2.24
CHD1O14646 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
CHD1O14646 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CHD1O14646 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CHD1O14646 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
CHD1O14646 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHD1O14646 CENPM-205ENST00000404067 905 ntTSL 3 BASIC29.06■■■□□ 2.24
CHD1O14646 KRT18P32-201ENST00000424695 1287 ntBASIC29.06■■■□□ 2.24
CHD1O14646 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC29.06■■■□□ 2.24
CHD1O14646 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHD1O14646 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC29.06■■■□□ 2.24
CHD1O14646 AC092667.1-201ENST00000434301 2586 ntBASIC29.06■■■□□ 2.24
CHD1O14646 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHD1O14646 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHD1O14646 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHD1O14646 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHD1O14646 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHD1O14646 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC29.06■■■□□ 2.24
CHD1O14646 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHD1O14646 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC29.06■■■□□ 2.24
CHD1O14646 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHD1O14646 S100A2-206ENST00000497140 697 ntTSL 2 BASIC29.06■■■□□ 2.24
CHD1O14646 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
CHD1O14646 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC29.06■■■□□ 2.24
CHD1O14646 AC023141.13-201ENST00000604991 943 ntBASIC29.06■■■□□ 2.24
CHD1O14646 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC29.06■■■□□ 2.24
CHD1O14646 MIR6752-201ENST00000618442 71 ntBASIC29.06■■■□□ 2.24
CHD1O14646 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC29.06■■■□□ 2.24
CHD1O14646 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHD1O14646 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHD1O14646 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC29.05■■■□□ 2.24
CHD1O14646 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CHD1O14646 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC29.05■■■□□ 2.24
CHD1O14646 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
CHD1O14646 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC29.05■■■□□ 2.24
CHD1O14646 AC099522.2-201ENST00000607001 744 ntBASIC29.05■■■□□ 2.24
CHD1O14646 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHD1O14646 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC29.05■■■□□ 2.24
CHD1O14646 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CHD1O14646 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CHD1O14646 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC29.04■■■□□ 2.24
CHD1O14646 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CHD1O14646 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CHD1O14646 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC29.04■■■□□ 2.24
CHD1O14646 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC29.04■■■□□ 2.24
CHD1O14646 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC29.04■■■□□ 2.24
CHD1O14646 AC007064.4-201ENST00000637740 555 ntBASIC29.04■■■□□ 2.24
CHD1O14646 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CHD1O14646 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CHD1O14646 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CHD1O14646 AL121761.2-201ENST00000598007 1648 ntBASIC29.04■■■□□ 2.24
CHD1O14646 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC29.04■■■□□ 2.24
CHD1O14646 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHD1O14646 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHD1O14646 AC055876.3-201ENST00000431496 288 ntBASIC29.03■■■□□ 2.24
CHD1O14646 CNN2P2-201ENST00000443536 909 ntBASIC29.03■■■□□ 2.24
CHD1O14646 CNN2P3-201ENST00000450201 906 ntBASIC29.03■■■□□ 2.24
CHD1O14646 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CHD1O14646 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC29.03■■■□□ 2.24
CHD1O14646 COX11-202ENST00000571584 1108 ntTSL 2 BASIC29.03■■■□□ 2.24
CHD1O14646 LINC02560-201ENST00000596379 459 ntBASIC29.03■■■□□ 2.24
CHD1O14646 AC138649.4-201ENST00000612222 287 ntBASIC29.03■■■□□ 2.24
CHD1O14646 AL136317.3-201ENST00000618497 906 ntBASIC29.03■■■□□ 2.24
CHD1O14646 GID4-202ENST00000376345 1391 ntTSL 3 BASIC29.03■■■□□ 2.24
CHD1O14646 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHD1O14646 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHD1O14646 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CHD1O14646 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CHD1O14646 LINC00565-201ENST00000562710 2331 ntBASIC29.03■■■□□ 2.24
CHD1O14646 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CHD1O14646 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC29.03■■■□□ 2.24
CHD1O14646 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHD1O14646 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
CHD1O14646 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC29.03■■■□□ 2.24
CHD1O14646 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHD1O14646 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CHD1O14646 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CHD1O14646 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CHD1O14646 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CHD1O14646 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC29.02■■■□□ 2.24
CHD1O14646 REM2-202ENST00000536884 1331 ntTSL 2 BASIC29.02■■■□□ 2.24
CHD1O14646 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CHD1O14646 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
CHD1O14646 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CHD1O14646 AP002414.1-201ENST00000391405 1147 ntBASIC29.02■■■□□ 2.24
CHD1O14646 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC29.02■■■□□ 2.24
CHD1O14646 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CHD1O14646 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC29.02■■■□□ 2.24
CHD1O14646 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
CHD1O14646 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC29.02■■■□□ 2.24
CHD1O14646 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
CHD1O14646 AC007375.3-201ENST00000600936 2314 ntBASIC29.01■■■□□ 2.24
CHD1O14646 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHD1O14646 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHD1O14646 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
CHD1O14646 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC29.01■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms