Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sgo2bJ3QMK1 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sgo2bJ3QMK1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sgo2bJ3QMK1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sgo2bJ3QMK1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sgo2bJ3QMK1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sgo2bJ3QMK1 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sgo2bJ3QMK1 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sgo2bJ3QMK1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.15■□□□□ 0.02
Sgo2bJ3QMK1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sgo2bJ3QMK1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sgo2bJ3QMK1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms