Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx6-2D3Z4R4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Gm26524-201ENSMUST00000192339 390 ntBASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Gm4974-201ENSMUST00000209974 875 ntBASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx6-2D3Z4R4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Mtag2-201ENSMUST00000058665 714 ntBASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx6-2D3Z4R4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms