Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Gm28729A0A1B0GSW2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Gm28729A0A1B0GSW2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Gm27920-201ENSMUST00000183953 96 ntBASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Gm29541-201ENSMUST00000191351 678 ntBASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Gm38225-201ENSMUST00000194001 393 ntBASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Gm28729A0A1B0GSW2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.75□□□□□ -0.05
Gm28729A0A1B0GSW2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Gm28729A0A1B0GSW2 Prob1-201ENSMUST00000097619 3021 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms