Protein–RNA interactions for Protein: A0A075B6B3

Trav6d-3, T cell receptor alpha variable 6D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-3A0A075B6B3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-3A0A075B6B3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-3A0A075B6B3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6d-3A0A075B6B3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-3A0A075B6B3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-3A0A075B6B3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-3A0A075B6B3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-3A0A075B6B3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-3A0A075B6B3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-3A0A075B6B3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-3A0A075B6B3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6d-3A0A075B6B3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6d-3A0A075B6B3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Gm12644-201ENSMUST00000119935 606 ntBASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Gm12134-201ENSMUST00000122109 520 ntBASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6d-3A0A075B6B3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6d-3A0A075B6B3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-3A0A075B6B3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-3A0A075B6B3 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-3A0A075B6B3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-3A0A075B6B3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-3A0A075B6B3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-3A0A075B6B3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6d-3A0A075B6B3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms