Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn6Q9Z262 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.08■□□□□ 0.97
Cldn6Q9Z262 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.08■□□□□ 0.97
Cldn6Q9Z262 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn6Q9Z262 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn6Q9Z262 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn6Q9Z262 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn6Q9Z262 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn6Q9Z262 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn6Q9Z262 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.06■□□□□ 0.96
Cldn6Q9Z262 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn6Q9Z262 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.05■□□□□ 0.96
Cldn6Q9Z262 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn6Q9Z262 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn6Q9Z262 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn6Q9Z262 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.04■□□□□ 0.96
Cldn6Q9Z262 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.04■□□□□ 0.96
Cldn6Q9Z262 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn6Q9Z262 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn6Q9Z262 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.02■□□□□ 0.96
Cldn6Q9Z262 Terc-201ENSMUST00000082862 423 ntBASIC21.02■□□□□ 0.96
Cldn6Q9Z262 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn6Q9Z262 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn6Q9Z262 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn6Q9Z262 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.02■□□□□ 0.96
Cldn6Q9Z262 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn6Q9Z262 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn6Q9Z262 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn6Q9Z262 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn6Q9Z262 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn6Q9Z262 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn6Q9Z262 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cldn6Q9Z262 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cldn6Q9Z262 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Cldn6Q9Z262 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cldn6Q9Z262 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cldn6Q9Z262 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21■□□□□ 0.95
Cldn6Q9Z262 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21■□□□□ 0.95
Cldn6Q9Z262 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cldn6Q9Z262 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn6Q9Z262 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn6Q9Z262 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn6Q9Z262 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn6Q9Z262 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn6Q9Z262 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn6Q9Z262 Gm6311-201ENSMUST00000073790 878 ntBASIC20.99■□□□□ 0.95
Cldn6Q9Z262 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn6Q9Z262 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn6Q9Z262 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cldn6Q9Z262 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.99■□□□□ 0.95
Cldn6Q9Z262 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn6Q9Z262 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn6Q9Z262 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.98■□□□□ 0.95
Cldn6Q9Z262 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn6Q9Z262 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.98■□□□□ 0.95
Cldn6Q9Z262 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn6Q9Z262 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.98■□□□□ 0.95
Cldn6Q9Z262 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn6Q9Z262 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn6Q9Z262 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn6Q9Z262 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn6Q9Z262 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cldn6Q9Z262 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn6Q9Z262 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn6Q9Z262 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn6Q9Z262 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn6Q9Z262 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn6Q9Z262 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cldn6Q9Z262 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.96■□□□□ 0.95
Cldn6Q9Z262 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Cldn6Q9Z262 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.95■□□□□ 0.94
Cldn6Q9Z262 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Cldn6Q9Z262 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.94■□□□□ 0.94
Cldn6Q9Z262 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn6Q9Z262 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn6Q9Z262 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Cldn6Q9Z262 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn6Q9Z262 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn6Q9Z262 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.94■□□□□ 0.94
Cldn6Q9Z262 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn6Q9Z262 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn6Q9Z262 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn6Q9Z262 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn6Q9Z262 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn6Q9Z262 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn6Q9Z262 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Cldn6Q9Z262 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.92■□□□□ 0.94
Cldn6Q9Z262 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn6Q9Z262 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cldn6Q9Z262 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cldn6Q9Z262 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.91■□□□□ 0.94
Cldn6Q9Z262 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn6Q9Z262 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cldn6Q9Z262 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cldn6Q9Z262 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn6Q9Z262 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cldn6Q9Z262 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn6Q9Z262 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.9■□□□□ 0.94
Cldn6Q9Z262 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn6Q9Z262 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms