Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nubp2Q9R061 Mir3960-201ENSMUST00000198213 73 ntBASIC19.77■□□□□ 0.76
Nubp2Q9R061 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nubp2Q9R061 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nubp2Q9R061 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nubp2Q9R061 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nubp2Q9R061 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nubp2Q9R061 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Nubp2Q9R061 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nubp2Q9R061 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nubp2Q9R061 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.73■□□□□ 0.75
Nubp2Q9R061 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nubp2Q9R061 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.73■□□□□ 0.75
Nubp2Q9R061 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nubp2Q9R061 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nubp2Q9R061 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nubp2Q9R061 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nubp2Q9R061 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nubp2Q9R061 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.72■□□□□ 0.75
Nubp2Q9R061 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.72■□□□□ 0.75
Nubp2Q9R061 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nubp2Q9R061 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nubp2Q9R061 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nubp2Q9R061 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nubp2Q9R061 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.71■□□□□ 0.75
Nubp2Q9R061 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nubp2Q9R061 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nubp2Q9R061 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nubp2Q9R061 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nubp2Q9R061 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nubp2Q9R061 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nubp2Q9R061 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nubp2Q9R061 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nubp2Q9R061 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nubp2Q9R061 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nubp2Q9R061 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nubp2Q9R061 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nubp2Q9R061 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nubp2Q9R061 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nubp2Q9R061 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nubp2Q9R061 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.68■□□□□ 0.74
Nubp2Q9R061 Gm45364-201ENSMUST00000210883 159 ntBASIC19.68■□□□□ 0.74
Nubp2Q9R061 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nubp2Q9R061 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nubp2Q9R061 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nubp2Q9R061 Scarna2-201ENSMUST00000157560 414 ntBASIC19.67■□□□□ 0.74
Nubp2Q9R061 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nubp2Q9R061 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nubp2Q9R061 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nubp2Q9R061 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.67■□□□□ 0.74
Nubp2Q9R061 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nubp2Q9R061 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nubp2Q9R061 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.66■□□□□ 0.74
Nubp2Q9R061 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nubp2Q9R061 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nubp2Q9R061 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Nubp2Q9R061 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nubp2Q9R061 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nubp2Q9R061 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nubp2Q9R061 Gm9806-201ENSMUST00000051080 552 ntBASIC19.65■□□□□ 0.74
Nubp2Q9R061 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nubp2Q9R061 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.65■□□□□ 0.74
Nubp2Q9R061 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nubp2Q9R061 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nubp2Q9R061 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.64■□□□□ 0.73
Nubp2Q9R061 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Nubp2Q9R061 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nubp2Q9R061 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nubp2Q9R061 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nubp2Q9R061 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nubp2Q9R061 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nubp2Q9R061 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.63■□□□□ 0.73
Nubp2Q9R061 Gm11687-201ENSMUST00000118911 886 ntBASIC19.63■□□□□ 0.73
Nubp2Q9R061 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nubp2Q9R061 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.63■□□□□ 0.73
Nubp2Q9R061 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.62■□□□□ 0.73
Nubp2Q9R061 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nubp2Q9R061 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nubp2Q9R061 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nubp2Q9R061 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nubp2Q9R061 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nubp2Q9R061 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nubp2Q9R061 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nubp2Q9R061 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nubp2Q9R061 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nubp2Q9R061 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nubp2Q9R061 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nubp2Q9R061 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nubp2Q9R061 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nubp2Q9R061 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nubp2Q9R061 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nubp2Q9R061 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.6■□□□□ 0.73
Nubp2Q9R061 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nubp2Q9R061 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nubp2Q9R061 Gm16437-201ENSMUST00000025669 507 ntBASIC19.6■□□□□ 0.73
Nubp2Q9R061 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nubp2Q9R061 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.59■□□□□ 0.73
Nubp2Q9R061 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nubp2Q9R061 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nubp2Q9R061 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms