Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.27■□□□□ 0.83
Clcf1Q9QZM3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Clcf1Q9QZM3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Gm12366-201ENSMUST00000121722 873 ntBASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Gm5786-201ENSMUST00000085368 882 ntBASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Clcf1Q9QZM3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcf1Q9QZM3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Clcf1Q9QZM3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcf1Q9QZM3 Terc-201ENSMUST00000082862 423 ntBASIC20.25■□□□□ 0.83
Clcf1Q9QZM3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Clcf1Q9QZM3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Clcf1Q9QZM3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcf1Q9QZM3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.24■□□□□ 0.83
Clcf1Q9QZM3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clcf1Q9QZM3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Clcf1Q9QZM3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Clcf1Q9QZM3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Clcf1Q9QZM3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcf1Q9QZM3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcf1Q9QZM3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clcf1Q9QZM3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clcf1Q9QZM3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Clcf1Q9QZM3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcf1Q9QZM3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Clcf1Q9QZM3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcf1Q9QZM3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Clcf1Q9QZM3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcf1Q9QZM3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.22■□□□□ 0.83
Clcf1Q9QZM3 Gm27502-201ENSMUST00000183495 199 ntBASIC20.22■□□□□ 0.83
Clcf1Q9QZM3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcf1Q9QZM3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Clcf1Q9QZM3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.22■□□□□ 0.83
Clcf1Q9QZM3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.21■□□□□ 0.83
Clcf1Q9QZM3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Clcf1Q9QZM3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.2■□□□□ 0.82
Clcf1Q9QZM3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Clcf1Q9QZM3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcf1Q9QZM3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Clcf1Q9QZM3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Clcf1Q9QZM3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcf1Q9QZM3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcf1Q9QZM3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Clcf1Q9QZM3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcf1Q9QZM3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.18■□□□□ 0.82
Clcf1Q9QZM3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcf1Q9QZM3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Clcf1Q9QZM3 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.16■□□□□ 0.82
Clcf1Q9QZM3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Clcf1Q9QZM3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.16■□□□□ 0.82
Clcf1Q9QZM3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Clcf1Q9QZM3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcf1Q9QZM3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Clcf1Q9QZM3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.15■□□□□ 0.82
Clcf1Q9QZM3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcf1Q9QZM3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcf1Q9QZM3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcf1Q9QZM3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Clcf1Q9QZM3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Clcf1Q9QZM3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcf1Q9QZM3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Clcf1Q9QZM3 Gm14523-201ENSMUST00000117260 558 ntBASIC20.14■□□□□ 0.81
Clcf1Q9QZM3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.14■□□□□ 0.81
Clcf1Q9QZM3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.14■□□□□ 0.81
Clcf1Q9QZM3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcf1Q9QZM3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcf1Q9QZM3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcf1Q9QZM3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Clcf1Q9QZM3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcf1Q9QZM3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Clcf1Q9QZM3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Clcf1Q9QZM3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Clcf1Q9QZM3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcf1Q9QZM3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcf1Q9QZM3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Clcf1Q9QZM3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcf1Q9QZM3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcf1Q9QZM3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcf1Q9QZM3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Clcf1Q9QZM3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcf1Q9QZM3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.11■□□□□ 0.81
Clcf1Q9QZM3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcf1Q9QZM3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Clcf1Q9QZM3 Gm7332-201ENSMUST00000118351 454 ntBASIC20.11■□□□□ 0.81
Clcf1Q9QZM3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.11■□□□□ 0.81
Clcf1Q9QZM3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Clcf1Q9QZM3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Clcf1Q9QZM3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Clcf1Q9QZM3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms