Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sec61a2Q9JLR1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.06■□□□□ 0.8
Sec61a2Q9JLR1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sec61a2Q9JLR1 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.06■□□□□ 0.8
Sec61a2Q9JLR1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sec61a2Q9JLR1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sec61a2Q9JLR1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sec61a2Q9JLR1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sec61a2Q9JLR1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.05■□□□□ 0.8
Sec61a2Q9JLR1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sec61a2Q9JLR1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sec61a2Q9JLR1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sec61a2Q9JLR1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sec61a2Q9JLR1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.04■□□□□ 0.8
Sec61a2Q9JLR1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.04■□□□□ 0.8
Sec61a2Q9JLR1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sec61a2Q9JLR1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sec61a2Q9JLR1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sec61a2Q9JLR1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sec61a2Q9JLR1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sec61a2Q9JLR1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Sec61a2Q9JLR1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Sec61a2Q9JLR1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.03■□□□□ 0.8
Sec61a2Q9JLR1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sec61a2Q9JLR1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sec61a2Q9JLR1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sec61a2Q9JLR1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Sec61a2Q9JLR1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
Sec61a2Q9JLR1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sec61a2Q9JLR1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sec61a2Q9JLR1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Sec61a2Q9JLR1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Sec61a2Q9JLR1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Sec61a2Q9JLR1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sec61a2Q9JLR1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sec61a2Q9JLR1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Sec61a2Q9JLR1 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.99■□□□□ 0.79
Sec61a2Q9JLR1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sec61a2Q9JLR1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.99■□□□□ 0.79
Sec61a2Q9JLR1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.99■□□□□ 0.79
Sec61a2Q9JLR1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sec61a2Q9JLR1 Gm6311-201ENSMUST00000073790 878 ntBASIC19.99■□□□□ 0.79
Sec61a2Q9JLR1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sec61a2Q9JLR1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sec61a2Q9JLR1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sec61a2Q9JLR1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sec61a2Q9JLR1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.98■□□□□ 0.79
Sec61a2Q9JLR1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Sec61a2Q9JLR1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sec61a2Q9JLR1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sec61a2Q9JLR1 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.98■□□□□ 0.79
Sec61a2Q9JLR1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Sec61a2Q9JLR1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.98■□□□□ 0.79
Sec61a2Q9JLR1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sec61a2Q9JLR1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sec61a2Q9JLR1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sec61a2Q9JLR1 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.97■□□□□ 0.79
Sec61a2Q9JLR1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sec61a2Q9JLR1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sec61a2Q9JLR1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Sec61a2Q9JLR1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Sec61a2Q9JLR1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sec61a2Q9JLR1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.96■□□□□ 0.79
Sec61a2Q9JLR1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Sec61a2Q9JLR1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sec61a2Q9JLR1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.95■□□□□ 0.78
Sec61a2Q9JLR1 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Sec61a2Q9JLR1 Mir3960-201ENSMUST00000198213 73 ntBASIC19.95■□□□□ 0.78
Sec61a2Q9JLR1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sec61a2Q9JLR1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sec61a2Q9JLR1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sec61a2Q9JLR1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sec61a2Q9JLR1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.94■□□□□ 0.78
Sec61a2Q9JLR1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Sec61a2Q9JLR1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sec61a2Q9JLR1 Gm45364-201ENSMUST00000210883 159 ntBASIC19.93■□□□□ 0.78
Sec61a2Q9JLR1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Sec61a2Q9JLR1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Sec61a2Q9JLR1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sec61a2Q9JLR1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sec61a2Q9JLR1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sec61a2Q9JLR1 Gm11175-201ENSMUST00000116172 543 ntBASIC19.92■□□□□ 0.78
Sec61a2Q9JLR1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.92■□□□□ 0.78
Sec61a2Q9JLR1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sec61a2Q9JLR1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sec61a2Q9JLR1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Sec61a2Q9JLR1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sec61a2Q9JLR1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Sec61a2Q9JLR1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sec61a2Q9JLR1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sec61a2Q9JLR1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sec61a2Q9JLR1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.9■□□□□ 0.78
Sec61a2Q9JLR1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sec61a2Q9JLR1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sec61a2Q9JLR1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sec61a2Q9JLR1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sec61a2Q9JLR1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Sec61a2Q9JLR1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Sec61a2Q9JLR1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.89■□□□□ 0.77
Sec61a2Q9JLR1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms