Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rhox4bQ9JI43 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rhox4bQ9JI43 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rhox4bQ9JI43 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rhox4bQ9JI43 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rhox4bQ9JI43 Gm16148-201ENSMUST00000119653 893 ntBASIC18.06■□□□□ 0.48
Rhox4bQ9JI43 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rhox4bQ9JI43 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rhox4bQ9JI43 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rhox4bQ9JI43 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rhox4bQ9JI43 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rhox4bQ9JI43 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rhox4bQ9JI43 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rhox4bQ9JI43 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rhox4bQ9JI43 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rhox4bQ9JI43 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rhox4bQ9JI43 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rhox4bQ9JI43 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rhox4bQ9JI43 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rhox4bQ9JI43 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rhox4bQ9JI43 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rhox4bQ9JI43 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rhox4bQ9JI43 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rhox4bQ9JI43 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rhox4bQ9JI43 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rhox4bQ9JI43 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rhox4bQ9JI43 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Rhox4bQ9JI43 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Rhox4bQ9JI43 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rhox4bQ9JI43 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rhox4bQ9JI43 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rhox4bQ9JI43 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rhox4bQ9JI43 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rhox4bQ9JI43 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rhox4bQ9JI43 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.01■□□□□ 0.47
Rhox4bQ9JI43 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.01■□□□□ 0.47
Rhox4bQ9JI43 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rhox4bQ9JI43 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rhox4bQ9JI43 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rhox4bQ9JI43 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rhox4bQ9JI43 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rhox4bQ9JI43 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rhox4bQ9JI43 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rhox4bQ9JI43 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rhox4bQ9JI43 Particl-201ENSMUST00000205370 1560 ntBASIC17.99■□□□□ 0.47
Rhox4bQ9JI43 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rhox4bQ9JI43 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rhox4bQ9JI43 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rhox4bQ9JI43 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rhox4bQ9JI43 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rhox4bQ9JI43 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rhox4bQ9JI43 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rhox4bQ9JI43 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.96■□□□□ 0.47
Rhox4bQ9JI43 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rhox4bQ9JI43 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rhox4bQ9JI43 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rhox4bQ9JI43 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rhox4bQ9JI43 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rhox4bQ9JI43 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rhox4bQ9JI43 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rhox4bQ9JI43 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rhox4bQ9JI43 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rhox4bQ9JI43 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rhox4bQ9JI43 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rhox4bQ9JI43 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rhox4bQ9JI43 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rhox4bQ9JI43 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rhox4bQ9JI43 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rhox4bQ9JI43 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rhox4bQ9JI43 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rhox4bQ9JI43 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rhox4bQ9JI43 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.94■□□□□ 0.46
Rhox4bQ9JI43 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rhox4bQ9JI43 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rhox4bQ9JI43 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rhox4bQ9JI43 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rhox4bQ9JI43 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.93■□□□□ 0.46
Rhox4bQ9JI43 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rhox4bQ9JI43 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rhox4bQ9JI43 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rhox4bQ9JI43 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rhox4bQ9JI43 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rhox4bQ9JI43 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rhox4bQ9JI43 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rhox4bQ9JI43 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rhox4bQ9JI43 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rhox4bQ9JI43 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rhox4bQ9JI43 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rhox4bQ9JI43 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rhox4bQ9JI43 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rhox4bQ9JI43 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rhox4bQ9JI43 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rhox4bQ9JI43 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rhox4bQ9JI43 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rhox4bQ9JI43 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.91■□□□□ 0.46
Rhox4bQ9JI43 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Rhox4bQ9JI43 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rhox4bQ9JI43 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rhox4bQ9JI43 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rhox4bQ9JI43 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms