Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vmn1r40Q9EQ46 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vmn1r40Q9EQ46 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Vmn1r40Q9EQ46 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vmn1r40Q9EQ46 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vmn1r40Q9EQ46 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Vmn1r40Q9EQ46 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.45■■□□□ 1.02
Vmn1r40Q9EQ46 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r40Q9EQ46 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r40Q9EQ46 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r40Q9EQ46 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Vmn1r40Q9EQ46 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.44■■□□□ 1.02
Vmn1r40Q9EQ46 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.43■■□□□ 1.02
Vmn1r40Q9EQ46 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Vmn1r40Q9EQ46 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Vmn1r40Q9EQ46 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Vmn1r40Q9EQ46 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.42■■□□□ 1.02
Vmn1r40Q9EQ46 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Vmn1r40Q9EQ46 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r40Q9EQ46 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r40Q9EQ46 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vmn1r40Q9EQ46 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r40Q9EQ46 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r40Q9EQ46 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vmn1r40Q9EQ46 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vmn1r40Q9EQ46 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r40Q9EQ46 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r40Q9EQ46 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vmn1r40Q9EQ46 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vmn1r40Q9EQ46 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Vmn1r40Q9EQ46 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Vmn1r40Q9EQ46 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Vmn1r40Q9EQ46 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r40Q9EQ46 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r40Q9EQ46 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r40Q9EQ46 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vmn1r40Q9EQ46 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r40Q9EQ46 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r40Q9EQ46 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Vmn1r40Q9EQ46 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r40Q9EQ46 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.35■■□□□ 1.01
Vmn1r40Q9EQ46 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vmn1r40Q9EQ46 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r40Q9EQ46 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r40Q9EQ46 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r40Q9EQ46 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r40Q9EQ46 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r40Q9EQ46 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r40Q9EQ46 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vmn1r40Q9EQ46 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.33■■□□□ 1.01
Vmn1r40Q9EQ46 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.33■■□□□ 1
Vmn1r40Q9EQ46 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vmn1r40Q9EQ46 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Vmn1r40Q9EQ46 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r40Q9EQ46 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r40Q9EQ46 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Vmn1r40Q9EQ46 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r40Q9EQ46 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r40Q9EQ46 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.31■■□□□ 1
Vmn1r40Q9EQ46 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r40Q9EQ46 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r40Q9EQ46 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Vmn1r40Q9EQ46 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r40Q9EQ46 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Vmn1r40Q9EQ46 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.3■■□□□ 1
Vmn1r40Q9EQ46 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r40Q9EQ46 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r40Q9EQ46 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r40Q9EQ46 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r40Q9EQ46 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r40Q9EQ46 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vmn1r40Q9EQ46 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.29■■□□□ 1
Vmn1r40Q9EQ46 Gm5921-201ENSMUST00000075898 882 ntBASIC21.29■■□□□ 1
Vmn1r40Q9EQ46 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vmn1r40Q9EQ46 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.28■■□□□ 1
Vmn1r40Q9EQ46 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Vmn1r40Q9EQ46 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vmn1r40Q9EQ46 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.27■■□□□ 1
Vmn1r40Q9EQ46 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r40Q9EQ46 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r40Q9EQ46 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r40Q9EQ46 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Vmn1r40Q9EQ46 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vmn1r40Q9EQ46 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vmn1r40Q9EQ46 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Vmn1r40Q9EQ46 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.26■□□□□ 0.99
Vmn1r40Q9EQ46 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vmn1r40Q9EQ46 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vmn1r40Q9EQ46 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r40Q9EQ46 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r40Q9EQ46 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Vmn1r40Q9EQ46 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.25■□□□□ 0.99
Vmn1r40Q9EQ46 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.25■□□□□ 0.99
Vmn1r40Q9EQ46 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r40Q9EQ46 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Vmn1r40Q9EQ46 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r40Q9EQ46 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.25■□□□□ 0.99
Vmn1r40Q9EQ46 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vmn1r40Q9EQ46 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vmn1r40Q9EQ46 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms