Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssr3Q9DCF9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssr3Q9DCF9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ssr3Q9DCF9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssr3Q9DCF9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ssr3Q9DCF9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ssr3Q9DCF9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssr3Q9DCF9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Ssr3Q9DCF9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssr3Q9DCF9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ssr3Q9DCF9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssr3Q9DCF9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssr3Q9DCF9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr3Q9DCF9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr3Q9DCF9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr3Q9DCF9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ssr3Q9DCF9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr3Q9DCF9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr3Q9DCF9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr3Q9DCF9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssr3Q9DCF9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ssr3Q9DCF9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssr3Q9DCF9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssr3Q9DCF9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ssr3Q9DCF9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ssr3Q9DCF9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssr3Q9DCF9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssr3Q9DCF9 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.1■□□□□ 0.81
Ssr3Q9DCF9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.1■□□□□ 0.81
Ssr3Q9DCF9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ssr3Q9DCF9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssr3Q9DCF9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ssr3Q9DCF9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ssr3Q9DCF9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ssr3Q9DCF9 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.09■□□□□ 0.81
Ssr3Q9DCF9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ssr3Q9DCF9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.09■□□□□ 0.81
Ssr3Q9DCF9 Gm8109-201ENSMUST00000194076 746 ntBASIC20.09■□□□□ 0.81
Ssr3Q9DCF9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ssr3Q9DCF9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ssr3Q9DCF9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ssr3Q9DCF9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssr3Q9DCF9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Ssr3Q9DCF9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssr3Q9DCF9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ssr3Q9DCF9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ssr3Q9DCF9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
Ssr3Q9DCF9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.08■□□□□ 0.8
Ssr3Q9DCF9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ssr3Q9DCF9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssr3Q9DCF9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssr3Q9DCF9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ssr3Q9DCF9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssr3Q9DCF9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssr3Q9DCF9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssr3Q9DCF9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ssr3Q9DCF9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssr3Q9DCF9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssr3Q9DCF9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssr3Q9DCF9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ssr3Q9DCF9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ssr3Q9DCF9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ssr3Q9DCF9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssr3Q9DCF9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ssr3Q9DCF9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssr3Q9DCF9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssr3Q9DCF9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssr3Q9DCF9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssr3Q9DCF9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssr3Q9DCF9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssr3Q9DCF9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Ssr3Q9DCF9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ssr3Q9DCF9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ssr3Q9DCF9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssr3Q9DCF9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssr3Q9DCF9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ssr3Q9DCF9 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.03■□□□□ 0.8
Ssr3Q9DCF9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssr3Q9DCF9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.03■□□□□ 0.8
Ssr3Q9DCF9 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.03■□□□□ 0.8
Ssr3Q9DCF9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ssr3Q9DCF9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssr3Q9DCF9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ssr3Q9DCF9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ssr3Q9DCF9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ssr3Q9DCF9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssr3Q9DCF9 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ssr3Q9DCF9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr3Q9DCF9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr3Q9DCF9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr3Q9DCF9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr3Q9DCF9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssr3Q9DCF9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssr3Q9DCF9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ssr3Q9DCF9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ssr3Q9DCF9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ssr3Q9DCF9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr3Q9DCF9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr3Q9DCF9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssr3Q9DCF9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms