Protein–RNA interactions for Protein: Q9D9V3

Echdc1, Ethylmalonyl-CoA decarboxylase, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc1Q9D9V3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC28.46■■■□□ 2.15
Echdc1Q9D9V3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Echdc1Q9D9V3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Echdc1Q9D9V3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.45■■■□□ 2.14
Echdc1Q9D9V3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
Echdc1Q9D9V3 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Echdc1Q9D9V3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28.44■■■□□ 2.14
Echdc1Q9D9V3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Echdc1Q9D9V3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.44■■■□□ 2.14
Echdc1Q9D9V3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Echdc1Q9D9V3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Echdc1Q9D9V3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Echdc1Q9D9V3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Echdc1Q9D9V3 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Echdc1Q9D9V3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC28.4■■■□□ 2.14
Echdc1Q9D9V3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
Echdc1Q9D9V3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Echdc1Q9D9V3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Echdc1Q9D9V3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
Echdc1Q9D9V3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC28.39■■■□□ 2.14
Echdc1Q9D9V3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.39■■■□□ 2.14
Echdc1Q9D9V3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Echdc1Q9D9V3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC28.38■■■□□ 2.13
Echdc1Q9D9V3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Echdc1Q9D9V3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Echdc1Q9D9V3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC28.37■■■□□ 2.13
Echdc1Q9D9V3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Echdc1Q9D9V3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Echdc1Q9D9V3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Echdc1Q9D9V3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Echdc1Q9D9V3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Echdc1Q9D9V3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Echdc1Q9D9V3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
Echdc1Q9D9V3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Echdc1Q9D9V3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Echdc1Q9D9V3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Echdc1Q9D9V3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Echdc1Q9D9V3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Echdc1Q9D9V3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC28.34■■■□□ 2.13
Echdc1Q9D9V3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Echdc1Q9D9V3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC28.33■■■□□ 2.13
Echdc1Q9D9V3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Echdc1Q9D9V3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
Echdc1Q9D9V3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Echdc1Q9D9V3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Echdc1Q9D9V3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Echdc1Q9D9V3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Echdc1Q9D9V3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Echdc1Q9D9V3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
Echdc1Q9D9V3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Echdc1Q9D9V3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
Echdc1Q9D9V3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Echdc1Q9D9V3 Gm10420-201ENSMUST00000121713 882 ntBASIC28.28■■■□□ 2.12
Echdc1Q9D9V3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
Echdc1Q9D9V3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Echdc1Q9D9V3 AC117769.4-201ENSMUST00000225679 685 ntBASIC28.26■■■□□ 2.11
Echdc1Q9D9V3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Echdc1Q9D9V3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC28.26■■■□□ 2.11
Echdc1Q9D9V3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Echdc1Q9D9V3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Echdc1Q9D9V3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC28.25■■■□□ 2.11
Echdc1Q9D9V3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC28.24■■■□□ 2.11
Echdc1Q9D9V3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Echdc1Q9D9V3 Gm5067-201ENSMUST00000170449 1009 ntBASIC28.24■■■□□ 2.11
Echdc1Q9D9V3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Echdc1Q9D9V3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC28.24■■■□□ 2.11
Echdc1Q9D9V3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
Echdc1Q9D9V3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC28.22■■■□□ 2.11
Echdc1Q9D9V3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Echdc1Q9D9V3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Echdc1Q9D9V3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Echdc1Q9D9V3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Echdc1Q9D9V3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
Echdc1Q9D9V3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Echdc1Q9D9V3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Echdc1Q9D9V3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Echdc1Q9D9V3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Echdc1Q9D9V3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Echdc1Q9D9V3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Echdc1Q9D9V3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Echdc1Q9D9V3 Gm7199-201ENSMUST00000118327 1485 ntBASIC28.2■■■□□ 2.1
Echdc1Q9D9V3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Echdc1Q9D9V3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Echdc1Q9D9V3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Echdc1Q9D9V3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Echdc1Q9D9V3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Echdc1Q9D9V3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.18■■■□□ 2.1
Echdc1Q9D9V3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Echdc1Q9D9V3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC28.18■■■□□ 2.1
Echdc1Q9D9V3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Echdc1Q9D9V3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Echdc1Q9D9V3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Echdc1Q9D9V3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC28.18■■■□□ 2.1
Echdc1Q9D9V3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Echdc1Q9D9V3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Echdc1Q9D9V3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Echdc1Q9D9V3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Echdc1Q9D9V3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Echdc1Q9D9V3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Echdc1Q9D9V3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms