Protein–RNA interactions for Protein: Q9D3I8

Rhox4a, Reproductive homeobox 4A, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4aQ9D3I8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.54■□□□□ 0.56
Rhox4aQ9D3I8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rhox4aQ9D3I8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rhox4aQ9D3I8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rhox4aQ9D3I8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rhox4aQ9D3I8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rhox4aQ9D3I8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rhox4aQ9D3I8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rhox4aQ9D3I8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.53■□□□□ 0.56
Rhox4aQ9D3I8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rhox4aQ9D3I8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rhox4aQ9D3I8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Rhox4aQ9D3I8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.52■□□□□ 0.55
Rhox4aQ9D3I8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rhox4aQ9D3I8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rhox4aQ9D3I8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rhox4aQ9D3I8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rhox4aQ9D3I8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rhox4aQ9D3I8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhox4aQ9D3I8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rhox4aQ9D3I8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhox4aQ9D3I8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhox4aQ9D3I8 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.5■□□□□ 0.55
Rhox4aQ9D3I8 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.5■□□□□ 0.55
Rhox4aQ9D3I8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhox4aQ9D3I8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhox4aQ9D3I8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rhox4aQ9D3I8 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.5■□□□□ 0.55
Rhox4aQ9D3I8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhox4aQ9D3I8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rhox4aQ9D3I8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.49■□□□□ 0.55
Rhox4aQ9D3I8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rhox4aQ9D3I8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4aQ9D3I8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rhox4aQ9D3I8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhox4aQ9D3I8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rhox4aQ9D3I8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rhox4aQ9D3I8 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.47■□□□□ 0.55
Rhox4aQ9D3I8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.47■□□□□ 0.55
Rhox4aQ9D3I8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rhox4aQ9D3I8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rhox4aQ9D3I8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rhox4aQ9D3I8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rhox4aQ9D3I8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rhox4aQ9D3I8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rhox4aQ9D3I8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rhox4aQ9D3I8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.45■□□□□ 0.54
Rhox4aQ9D3I8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rhox4aQ9D3I8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Rhox4aQ9D3I8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rhox4aQ9D3I8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.45■□□□□ 0.54
Rhox4aQ9D3I8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rhox4aQ9D3I8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Rhox4aQ9D3I8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rhox4aQ9D3I8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rhox4aQ9D3I8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rhox4aQ9D3I8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rhox4aQ9D3I8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rhox4aQ9D3I8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.44■□□□□ 0.54
Rhox4aQ9D3I8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rhox4aQ9D3I8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rhox4aQ9D3I8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rhox4aQ9D3I8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Rhox4aQ9D3I8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rhox4aQ9D3I8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rhox4aQ9D3I8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Rhox4aQ9D3I8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.43■□□□□ 0.54
Rhox4aQ9D3I8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rhox4aQ9D3I8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rhox4aQ9D3I8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rhox4aQ9D3I8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.42■□□□□ 0.54
Rhox4aQ9D3I8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.42■□□□□ 0.54
Rhox4aQ9D3I8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Rhox4aQ9D3I8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rhox4aQ9D3I8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rhox4aQ9D3I8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rhox4aQ9D3I8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
Rhox4aQ9D3I8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rhox4aQ9D3I8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rhox4aQ9D3I8 Zfp131-205ENSMUST00000223812 663 ntBASIC18.41■□□□□ 0.54
Rhox4aQ9D3I8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rhox4aQ9D3I8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rhox4aQ9D3I8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.4■□□□□ 0.54
Rhox4aQ9D3I8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rhox4aQ9D3I8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rhox4aQ9D3I8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.4■□□□□ 0.54
Rhox4aQ9D3I8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rhox4aQ9D3I8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Rhox4aQ9D3I8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rhox4aQ9D3I8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rhox4aQ9D3I8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rhox4aQ9D3I8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rhox4aQ9D3I8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rhox4aQ9D3I8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rhox4aQ9D3I8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rhox4aQ9D3I8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.39■□□□□ 0.53
Rhox4aQ9D3I8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.39■□□□□ 0.53
Rhox4aQ9D3I8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.39■□□□□ 0.53
Rhox4aQ9D3I8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rhox4aQ9D3I8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 795.7 ms