Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.1■□□□□ 0.97
Chaf1bQ9D0N7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chaf1bQ9D0N7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chaf1bQ9D0N7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
Chaf1bQ9D0N7 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chaf1bQ9D0N7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chaf1bQ9D0N7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chaf1bQ9D0N7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Chaf1bQ9D0N7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chaf1bQ9D0N7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Chaf1bQ9D0N7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chaf1bQ9D0N7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Chaf1bQ9D0N7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chaf1bQ9D0N7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chaf1bQ9D0N7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chaf1bQ9D0N7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chaf1bQ9D0N7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1bQ9D0N7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1bQ9D0N7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1bQ9D0N7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1bQ9D0N7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chaf1bQ9D0N7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Chaf1bQ9D0N7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chaf1bQ9D0N7 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chaf1bQ9D0N7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chaf1bQ9D0N7 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chaf1bQ9D0N7 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.06■□□□□ 0.96
Chaf1bQ9D0N7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Chaf1bQ9D0N7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chaf1bQ9D0N7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chaf1bQ9D0N7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Chaf1bQ9D0N7 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chaf1bQ9D0N7 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chaf1bQ9D0N7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chaf1bQ9D0N7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chaf1bQ9D0N7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chaf1bQ9D0N7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chaf1bQ9D0N7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chaf1bQ9D0N7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chaf1bQ9D0N7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Chaf1bQ9D0N7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chaf1bQ9D0N7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chaf1bQ9D0N7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chaf1bQ9D0N7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chaf1bQ9D0N7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chaf1bQ9D0N7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chaf1bQ9D0N7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chaf1bQ9D0N7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chaf1bQ9D0N7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Chaf1bQ9D0N7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chaf1bQ9D0N7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chaf1bQ9D0N7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chaf1bQ9D0N7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chaf1bQ9D0N7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chaf1bQ9D0N7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chaf1bQ9D0N7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Chaf1bQ9D0N7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.01■□□□□ 0.95
Chaf1bQ9D0N7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chaf1bQ9D0N7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chaf1bQ9D0N7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Chaf1bQ9D0N7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Chaf1bQ9D0N7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Chaf1bQ9D0N7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1bQ9D0N7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1bQ9D0N7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1bQ9D0N7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1bQ9D0N7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1bQ9D0N7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chaf1bQ9D0N7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.97■□□□□ 0.95
Chaf1bQ9D0N7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.97■□□□□ 0.95
Chaf1bQ9D0N7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1bQ9D0N7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chaf1bQ9D0N7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Chaf1bQ9D0N7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.96■□□□□ 0.95
Chaf1bQ9D0N7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Chaf1bQ9D0N7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Chaf1bQ9D0N7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Chaf1bQ9D0N7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Chaf1bQ9D0N7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1bQ9D0N7 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1bQ9D0N7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1bQ9D0N7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1bQ9D0N7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1bQ9D0N7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1bQ9D0N7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1bQ9D0N7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1bQ9D0N7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1bQ9D0N7 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Chaf1bQ9D0N7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1bQ9D0N7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Chaf1bQ9D0N7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1bQ9D0N7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.93■□□□□ 0.94
Chaf1bQ9D0N7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Chaf1bQ9D0N7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Chaf1bQ9D0N7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1bQ9D0N7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1bQ9D0N7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1bQ9D0N7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
Chaf1bQ9D0N7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Chaf1bQ9D0N7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms