Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Rnf135Q9CWS1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf135Q9CWS1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf135Q9CWS1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.36■■□□□ 1.33
Rnf135Q9CWS1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf135Q9CWS1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf135Q9CWS1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
Rnf135Q9CWS1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf135Q9CWS1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf135Q9CWS1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.35■■□□□ 1.33
Rnf135Q9CWS1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf135Q9CWS1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf135Q9CWS1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf135Q9CWS1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf135Q9CWS1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf135Q9CWS1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Rnf135Q9CWS1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf135Q9CWS1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Rnf135Q9CWS1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf135Q9CWS1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf135Q9CWS1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rnf135Q9CWS1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.32■■□□□ 1.32
Rnf135Q9CWS1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Rnf135Q9CWS1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf135Q9CWS1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Rnf135Q9CWS1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Rnf135Q9CWS1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf135Q9CWS1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Rnf135Q9CWS1 Gm11175-201ENSMUST00000116172 543 ntBASIC23.3■■□□□ 1.32
Rnf135Q9CWS1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf135Q9CWS1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf135Q9CWS1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rnf135Q9CWS1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
Rnf135Q9CWS1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
Rnf135Q9CWS1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf135Q9CWS1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf135Q9CWS1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Rnf135Q9CWS1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf135Q9CWS1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf135Q9CWS1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Rnf135Q9CWS1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
Rnf135Q9CWS1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf135Q9CWS1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.27■■□□□ 1.32
Rnf135Q9CWS1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Rnf135Q9CWS1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf135Q9CWS1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf135Q9CWS1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.31
Rnf135Q9CWS1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf135Q9CWS1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf135Q9CWS1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf135Q9CWS1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.25■■□□□ 1.31
Rnf135Q9CWS1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf135Q9CWS1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Rnf135Q9CWS1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf135Q9CWS1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf135Q9CWS1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf135Q9CWS1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf135Q9CWS1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf135Q9CWS1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf135Q9CWS1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf135Q9CWS1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf135Q9CWS1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf135Q9CWS1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf135Q9CWS1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Rnf135Q9CWS1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf135Q9CWS1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf135Q9CWS1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf135Q9CWS1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf135Q9CWS1 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.21■■□□□ 1.31
Rnf135Q9CWS1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf135Q9CWS1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf135Q9CWS1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf135Q9CWS1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Rnf135Q9CWS1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf135Q9CWS1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf135Q9CWS1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf135Q9CWS1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.18■■□□□ 1.3
Rnf135Q9CWS1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf135Q9CWS1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Rnf135Q9CWS1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf135Q9CWS1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf135Q9CWS1 Gm6311-201ENSMUST00000073790 878 ntBASIC23.17■■□□□ 1.3
Rnf135Q9CWS1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf135Q9CWS1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf135Q9CWS1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf135Q9CWS1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf135Q9CWS1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf135Q9CWS1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf135Q9CWS1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf135Q9CWS1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf135Q9CWS1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf135Q9CWS1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.15■■□□□ 1.3
Rnf135Q9CWS1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf135Q9CWS1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rnf135Q9CWS1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Rnf135Q9CWS1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rnf135Q9CWS1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Rnf135Q9CWS1 Cap2-205ENSMUST00000225824 1634 ntBASIC23.14■■□□□ 1.29
Rnf135Q9CWS1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rnf135Q9CWS1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms