Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2afb1Q9CQ70 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2afb1Q9CQ70 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.35■□□□□ 0.53
H2afb1Q9CQ70 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb1Q9CQ70 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
H2afb1Q9CQ70 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb1Q9CQ70 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb1Q9CQ70 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb1Q9CQ70 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
H2afb1Q9CQ70 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
H2afb1Q9CQ70 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
H2afb1Q9CQ70 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
H2afb1Q9CQ70 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
H2afb1Q9CQ70 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
H2afb1Q9CQ70 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
H2afb1Q9CQ70 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
H2afb1Q9CQ70 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb1Q9CQ70 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb1Q9CQ70 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb1Q9CQ70 Gm7432-201ENSMUST00000210343 879 ntBASIC18.32■□□□□ 0.52
H2afb1Q9CQ70 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.32■□□□□ 0.52
H2afb1Q9CQ70 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb1Q9CQ70 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afb1Q9CQ70 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.32■□□□□ 0.52
H2afb1Q9CQ70 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb1Q9CQ70 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb1Q9CQ70 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb1Q9CQ70 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb1Q9CQ70 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afb1Q9CQ70 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.3■□□□□ 0.52
H2afb1Q9CQ70 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb1Q9CQ70 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb1Q9CQ70 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.3■□□□□ 0.52
H2afb1Q9CQ70 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb1Q9CQ70 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
H2afb1Q9CQ70 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H2afb1Q9CQ70 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
H2afb1Q9CQ70 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb1Q9CQ70 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb1Q9CQ70 Gm9812-201ENSMUST00000061934 968 ntBASIC18.29■□□□□ 0.52
H2afb1Q9CQ70 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.29■□□□□ 0.52
H2afb1Q9CQ70 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.29■□□□□ 0.52
H2afb1Q9CQ70 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afb1Q9CQ70 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb1Q9CQ70 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
H2afb1Q9CQ70 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
H2afb1Q9CQ70 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
H2afb1Q9CQ70 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afb1Q9CQ70 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
H2afb1Q9CQ70 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
H2afb1Q9CQ70 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afb1Q9CQ70 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.27■□□□□ 0.52
H2afb1Q9CQ70 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afb1Q9CQ70 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afb1Q9CQ70 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afb1Q9CQ70 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
H2afb1Q9CQ70 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb1Q9CQ70 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb1Q9CQ70 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
H2afb1Q9CQ70 Mir3960-201ENSMUST00000198213 73 ntBASIC18.26■□□□□ 0.51
H2afb1Q9CQ70 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
H2afb1Q9CQ70 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.26■□□□□ 0.51
H2afb1Q9CQ70 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb1Q9CQ70 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb1Q9CQ70 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb1Q9CQ70 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
H2afb1Q9CQ70 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.26■□□□□ 0.51
H2afb1Q9CQ70 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb1Q9CQ70 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb1Q9CQ70 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb1Q9CQ70 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb1Q9CQ70 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb1Q9CQ70 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
H2afb1Q9CQ70 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H2afb1Q9CQ70 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.24■□□□□ 0.51
H2afb1Q9CQ70 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb1Q9CQ70 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb1Q9CQ70 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb1Q9CQ70 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.24■□□□□ 0.51
H2afb1Q9CQ70 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb1Q9CQ70 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
H2afb1Q9CQ70 Gm11599-201ENSMUST00000118720 878 ntBASIC18.24■□□□□ 0.51
H2afb1Q9CQ70 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.24■□□□□ 0.51
H2afb1Q9CQ70 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb1Q9CQ70 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
H2afb1Q9CQ70 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb1Q9CQ70 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
H2afb1Q9CQ70 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.23■□□□□ 0.51
H2afb1Q9CQ70 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb1Q9CQ70 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb1Q9CQ70 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
H2afb1Q9CQ70 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb1Q9CQ70 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb1Q9CQ70 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.22■□□□□ 0.51
H2afb1Q9CQ70 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb1Q9CQ70 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb1Q9CQ70 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
H2afb1Q9CQ70 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.21■□□□□ 0.51
H2afb1Q9CQ70 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb1Q9CQ70 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms