Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim16Q99PP9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim16Q99PP9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Trim16Q99PP9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Trim16Q99PP9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.73■■□□□ 1.07
Trim16Q99PP9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim16Q99PP9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim16Q99PP9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trim16Q99PP9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim16Q99PP9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.72■■□□□ 1.07
Trim16Q99PP9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim16Q99PP9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim16Q99PP9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim16Q99PP9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim16Q99PP9 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.72■■□□□ 1.07
Trim16Q99PP9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim16Q99PP9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim16Q99PP9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim16Q99PP9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim16Q99PP9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
Trim16Q99PP9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Trim16Q99PP9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim16Q99PP9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Trim16Q99PP9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim16Q99PP9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim16Q99PP9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim16Q99PP9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim16Q99PP9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim16Q99PP9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim16Q99PP9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim16Q99PP9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim16Q99PP9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Trim16Q99PP9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.69■■□□□ 1.06
Trim16Q99PP9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim16Q99PP9 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.68■■□□□ 1.06
Trim16Q99PP9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim16Q99PP9 Mir3960-201ENSMUST00000198213 73 ntBASIC21.68■■□□□ 1.06
Trim16Q99PP9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.68■■□□□ 1.06
Trim16Q99PP9 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.68■■□□□ 1.06
Trim16Q99PP9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Trim16Q99PP9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim16Q99PP9 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.67■■□□□ 1.06
Trim16Q99PP9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.67■■□□□ 1.06
Trim16Q99PP9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim16Q99PP9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim16Q99PP9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim16Q99PP9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.66■■□□□ 1.06
Trim16Q99PP9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim16Q99PP9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim16Q99PP9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim16Q99PP9 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.66■■□□□ 1.06
Trim16Q99PP9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim16Q99PP9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim16Q99PP9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim16Q99PP9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Trim16Q99PP9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim16Q99PP9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim16Q99PP9 Gm45364-201ENSMUST00000210883 159 ntBASIC21.65■■□□□ 1.06
Trim16Q99PP9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim16Q99PP9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trim16Q99PP9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Trim16Q99PP9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.64■■□□□ 1.06
Trim16Q99PP9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim16Q99PP9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
Trim16Q99PP9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim16Q99PP9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim16Q99PP9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim16Q99PP9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim16Q99PP9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim16Q99PP9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.62■■□□□ 1.05
Trim16Q99PP9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.62■■□□□ 1.05
Trim16Q99PP9 Gm6311-201ENSMUST00000073790 878 ntBASIC21.62■■□□□ 1.05
Trim16Q99PP9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim16Q99PP9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Trim16Q99PP9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.61■■□□□ 1.05
Trim16Q99PP9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim16Q99PP9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim16Q99PP9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim16Q99PP9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim16Q99PP9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Trim16Q99PP9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim16Q99PP9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim16Q99PP9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim16Q99PP9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.6■■□□□ 1.05
Trim16Q99PP9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trim16Q99PP9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trim16Q99PP9 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.59■■□□□ 1.05
Trim16Q99PP9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trim16Q99PP9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trim16Q99PP9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Trim16Q99PP9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trim16Q99PP9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim16Q99PP9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.57■■□□□ 1.04
Trim16Q99PP9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trim16Q99PP9 Gm9812-201ENSMUST00000061934 968 ntBASIC21.57■■□□□ 1.04
Trim16Q99PP9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Trim16Q99PP9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trim16Q99PP9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim16Q99PP9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trim16Q99PP9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms