Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4rQ99PI8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn4rQ99PI8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtn4rQ99PI8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtn4rQ99PI8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn4rQ99PI8 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.82■□□□□ 0.76
Rtn4rQ99PI8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn4rQ99PI8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn4rQ99PI8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Rtn4rQ99PI8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4rQ99PI8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rtn4rQ99PI8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rtn4rQ99PI8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4rQ99PI8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.81■□□□□ 0.76
Rtn4rQ99PI8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rtn4rQ99PI8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4rQ99PI8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Rtn4rQ99PI8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4rQ99PI8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Rtn4rQ99PI8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4rQ99PI8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4rQ99PI8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4rQ99PI8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Rtn4rQ99PI8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.8■□□□□ 0.76
Rtn4rQ99PI8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4rQ99PI8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rtn4rQ99PI8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4rQ99PI8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rtn4rQ99PI8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4rQ99PI8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rtn4rQ99PI8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.79■□□□□ 0.76
Rtn4rQ99PI8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4rQ99PI8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4rQ99PI8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4rQ99PI8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4rQ99PI8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rtn4rQ99PI8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Rtn4rQ99PI8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.77■□□□□ 0.76
Rtn4rQ99PI8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rtn4rQ99PI8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Rtn4rQ99PI8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rtn4rQ99PI8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rtn4rQ99PI8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rtn4rQ99PI8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn4rQ99PI8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Rtn4rQ99PI8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.75■□□□□ 0.75
Rtn4rQ99PI8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn4rQ99PI8 Gm27502-201ENSMUST00000183495 199 ntBASIC19.75■□□□□ 0.75
Rtn4rQ99PI8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn4rQ99PI8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rtn4rQ99PI8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn4rQ99PI8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rtn4rQ99PI8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn4rQ99PI8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn4rQ99PI8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn4rQ99PI8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.74■□□□□ 0.75
Rtn4rQ99PI8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rtn4rQ99PI8 Cap2-205ENSMUST00000225824 1634 ntBASIC19.73■□□□□ 0.75
Rtn4rQ99PI8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn4rQ99PI8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rtn4rQ99PI8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.72■□□□□ 0.75
Rtn4rQ99PI8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rtn4rQ99PI8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.72■□□□□ 0.75
Rtn4rQ99PI8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.72■□□□□ 0.75
Rtn4rQ99PI8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4rQ99PI8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rtn4rQ99PI8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rtn4rQ99PI8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4rQ99PI8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4rQ99PI8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4rQ99PI8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4rQ99PI8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4rQ99PI8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rtn4rQ99PI8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4rQ99PI8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.69■□□□□ 0.74
Rtn4rQ99PI8 Gm12366-201ENSMUST00000121722 873 ntBASIC19.69■□□□□ 0.74
Rtn4rQ99PI8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtn4rQ99PI8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtn4rQ99PI8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4rQ99PI8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.69■□□□□ 0.74
Rtn4rQ99PI8 Gm5786-201ENSMUST00000085368 882 ntBASIC19.69■□□□□ 0.74
Rtn4rQ99PI8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4rQ99PI8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Rtn4rQ99PI8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.69■□□□□ 0.74
Rtn4rQ99PI8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rtn4rQ99PI8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rtn4rQ99PI8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4rQ99PI8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rtn4rQ99PI8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.68■□□□□ 0.74
Rtn4rQ99PI8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.67■□□□□ 0.74
Rtn4rQ99PI8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4rQ99PI8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4rQ99PI8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4rQ99PI8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4rQ99PI8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4rQ99PI8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rtn4rQ99PI8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4rQ99PI8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4rQ99PI8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn4rQ99PI8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms