Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf111Q99ML9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Rnf111Q99ML9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf111Q99ML9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf111Q99ML9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf111Q99ML9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf111Q99ML9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Rnf111Q99ML9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf111Q99ML9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf111Q99ML9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.8■■□□□ 1.08
Rnf111Q99ML9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf111Q99ML9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf111Q99ML9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf111Q99ML9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf111Q99ML9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf111Q99ML9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf111Q99ML9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf111Q99ML9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.78■■□□□ 1.08
Rnf111Q99ML9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.78■■□□□ 1.08
Rnf111Q99ML9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
Rnf111Q99ML9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf111Q99ML9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf111Q99ML9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Rnf111Q99ML9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.77■■□□□ 1.08
Rnf111Q99ML9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.77■■□□□ 1.08
Rnf111Q99ML9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf111Q99ML9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf111Q99ML9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Rnf111Q99ML9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf111Q99ML9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.75■■□□□ 1.07
Rnf111Q99ML9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf111Q99ML9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf111Q99ML9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf111Q99ML9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf111Q99ML9 Gm37136-201ENSMUST00000194368 194 ntBASIC21.74■■□□□ 1.07
Rnf111Q99ML9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf111Q99ML9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Rnf111Q99ML9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf111Q99ML9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf111Q99ML9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf111Q99ML9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf111Q99ML9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf111Q99ML9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf111Q99ML9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Rnf111Q99ML9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.72■■□□□ 1.07
Rnf111Q99ML9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Rnf111Q99ML9 Gm7432-201ENSMUST00000210343 879 ntBASIC21.72■■□□□ 1.07
Rnf111Q99ML9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf111Q99ML9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Rnf111Q99ML9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf111Q99ML9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf111Q99ML9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf111Q99ML9 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.71■■□□□ 1.07
Rnf111Q99ML9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf111Q99ML9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf111Q99ML9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf111Q99ML9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf111Q99ML9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf111Q99ML9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf111Q99ML9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf111Q99ML9 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.7■■□□□ 1.06
Rnf111Q99ML9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf111Q99ML9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf111Q99ML9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf111Q99ML9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf111Q99ML9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf111Q99ML9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Rnf111Q99ML9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf111Q99ML9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf111Q99ML9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf111Q99ML9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf111Q99ML9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf111Q99ML9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf111Q99ML9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf111Q99ML9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf111Q99ML9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf111Q99ML9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf111Q99ML9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf111Q99ML9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf111Q99ML9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf111Q99ML9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf111Q99ML9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf111Q99ML9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.66■■□□□ 1.06
Rnf111Q99ML9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf111Q99ML9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf111Q99ML9 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.65■■□□□ 1.06
Rnf111Q99ML9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf111Q99ML9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf111Q99ML9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.65■■□□□ 1.06
Rnf111Q99ML9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf111Q99ML9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rnf111Q99ML9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf111Q99ML9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rnf111Q99ML9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rnf111Q99ML9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf111Q99ML9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf111Q99ML9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rnf111Q99ML9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
Rnf111Q99ML9 Gm11599-201ENSMUST00000118720 878 ntBASIC21.63■■□□□ 1.05
Rnf111Q99ML9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms