Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Nkx6-1Q99MA9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nkx6-1Q99MA9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Nkx6-1Q99MA9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.36■■□□□ 1.01
Nkx6-1Q99MA9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.36■■□□□ 1.01
Nkx6-1Q99MA9 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.35■■□□□ 1.01
Nkx6-1Q99MA9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nkx6-1Q99MA9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nkx6-1Q99MA9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nkx6-1Q99MA9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.33■■□□□ 1.01
Nkx6-1Q99MA9 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.33■■□□□ 1.01
Nkx6-1Q99MA9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
Nkx6-1Q99MA9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nkx6-1Q99MA9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Nkx6-1Q99MA9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nkx6-1Q99MA9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.32■■□□□ 1
Nkx6-1Q99MA9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Nkx6-1Q99MA9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.32■■□□□ 1
Nkx6-1Q99MA9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nkx6-1Q99MA9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nkx6-1Q99MA9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nkx6-1Q99MA9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nkx6-1Q99MA9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.32■■□□□ 1
Nkx6-1Q99MA9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nkx6-1Q99MA9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.3■■□□□ 1
Nkx6-1Q99MA9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
Nkx6-1Q99MA9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.29■■□□□ 1
Nkx6-1Q99MA9 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.29■■□□□ 1
Nkx6-1Q99MA9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nkx6-1Q99MA9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nkx6-1Q99MA9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nkx6-1Q99MA9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nkx6-1Q99MA9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Nkx6-1Q99MA9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.28■■□□□ 1
Nkx6-1Q99MA9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Nkx6-1Q99MA9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.27■■□□□ 1
Nkx6-1Q99MA9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.27■■□□□ 1
Nkx6-1Q99MA9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Nkx6-1Q99MA9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nkx6-1Q99MA9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nkx6-1Q99MA9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.26■□□□□ 0.99
Nkx6-1Q99MA9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nkx6-1Q99MA9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nkx6-1Q99MA9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nkx6-1Q99MA9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Nkx6-1Q99MA9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nkx6-1Q99MA9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nkx6-1Q99MA9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nkx6-1Q99MA9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nkx6-1Q99MA9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nkx6-1Q99MA9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nkx6-1Q99MA9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Nkx6-1Q99MA9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Nkx6-1Q99MA9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.24■□□□□ 0.99
Nkx6-1Q99MA9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkx6-1Q99MA9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkx6-1Q99MA9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkx6-1Q99MA9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nkx6-1Q99MA9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nkx6-1Q99MA9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.22■□□□□ 0.99
Nkx6-1Q99MA9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.22■□□□□ 0.99
Nkx6-1Q99MA9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nkx6-1Q99MA9 Etf1-202ENSMUST00000180351 108 ntBASIC21.21■□□□□ 0.99
Nkx6-1Q99MA9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.21■□□□□ 0.99
Nkx6-1Q99MA9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.21■□□□□ 0.99
Nkx6-1Q99MA9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nkx6-1Q99MA9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nkx6-1Q99MA9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nkx6-1Q99MA9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nkx6-1Q99MA9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nkx6-1Q99MA9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nkx6-1Q99MA9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.2■□□□□ 0.98
Nkx6-1Q99MA9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nkx6-1Q99MA9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nkx6-1Q99MA9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Nkx6-1Q99MA9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.19■□□□□ 0.98
Nkx6-1Q99MA9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Nkx6-1Q99MA9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Nkx6-1Q99MA9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx6-1Q99MA9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx6-1Q99MA9 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx6-1Q99MA9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx6-1Q99MA9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx6-1Q99MA9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nkx6-1Q99MA9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx6-1Q99MA9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx6-1Q99MA9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx6-1Q99MA9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.17■□□□□ 0.98
Nkx6-1Q99MA9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx6-1Q99MA9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nkx6-1Q99MA9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx6-1Q99MA9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx6-1Q99MA9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx6-1Q99MA9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx6-1Q99MA9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.16■□□□□ 0.98
Nkx6-1Q99MA9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.16■□□□□ 0.98
Nkx6-1Q99MA9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx6-1Q99MA9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nkx6-1Q99MA9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Nkx6-1Q99MA9 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms