Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.26■■□□□ 1.79
Rfc4Q99J62 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.26■■□□□ 1.79
Rfc4Q99J62 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.26■■□□□ 1.79
Rfc4Q99J62 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rfc4Q99J62 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rfc4Q99J62 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rfc4Q99J62 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rfc4Q99J62 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rfc4Q99J62 Gm43566-201ENSMUST00000196851 808 ntBASIC26.25■■□□□ 1.79
Rfc4Q99J62 Gm15820-201ENSMUST00000201566 728 ntBASIC26.25■■□□□ 1.79
Rfc4Q99J62 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rfc4Q99J62 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rfc4Q99J62 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
Rfc4Q99J62 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rfc4Q99J62 Gm13238-201ENSMUST00000117655 780 ntBASIC26.24■■□□□ 1.79
Rfc4Q99J62 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.23■■□□□ 1.79
Rfc4Q99J62 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rfc4Q99J62 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Rfc4Q99J62 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rfc4Q99J62 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rfc4Q99J62 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rfc4Q99J62 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rfc4Q99J62 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.22■■□□□ 1.79
Rfc4Q99J62 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rfc4Q99J62 Rps24-207ENSMUST00000224568 714 ntBASIC26.21■■□□□ 1.79
Rfc4Q99J62 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.2■■□□□ 1.78
Rfc4Q99J62 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rfc4Q99J62 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.18■■□□□ 1.78
Rfc4Q99J62 Gm45444-201ENSMUST00000211394 898 ntBASIC26.18■■□□□ 1.78
Rfc4Q99J62 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.18■■□□□ 1.78
Rfc4Q99J62 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rfc4Q99J62 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.17■■□□□ 1.78
Rfc4Q99J62 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rfc4Q99J62 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.17■■□□□ 1.78
Rfc4Q99J62 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rfc4Q99J62 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rfc4Q99J62 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Rfc4Q99J62 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rfc4Q99J62 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Rfc4Q99J62 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Rfc4Q99J62 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.16■■□□□ 1.78
Rfc4Q99J62 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rfc4Q99J62 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Rfc4Q99J62 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Rfc4Q99J62 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Rfc4Q99J62 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rfc4Q99J62 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
Rfc4Q99J62 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Rfc4Q99J62 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Rfc4Q99J62 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.13■■□□□ 1.77
Rfc4Q99J62 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.13■■□□□ 1.77
Rfc4Q99J62 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.12■■□□□ 1.77
Rfc4Q99J62 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
Rfc4Q99J62 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Rfc4Q99J62 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Rfc4Q99J62 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Rfc4Q99J62 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Rfc4Q99J62 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.09■■□□□ 1.77
Rfc4Q99J62 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Rfc4Q99J62 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.09■■□□□ 1.77
Rfc4Q99J62 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rfc4Q99J62 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rfc4Q99J62 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rfc4Q99J62 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Rfc4Q99J62 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rfc4Q99J62 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Rfc4Q99J62 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.08■■□□□ 1.77
Rfc4Q99J62 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Rfc4Q99J62 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
Rfc4Q99J62 Gm45102-201ENSMUST00000207427 857 ntBASIC26.07■■□□□ 1.76
Rfc4Q99J62 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rfc4Q99J62 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Rfc4Q99J62 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rfc4Q99J62 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rfc4Q99J62 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rfc4Q99J62 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.06■■□□□ 1.76
Rfc4Q99J62 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rfc4Q99J62 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rfc4Q99J62 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Rfc4Q99J62 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.05■■□□□ 1.76
Rfc4Q99J62 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rfc4Q99J62 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Rfc4Q99J62 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Rfc4Q99J62 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.04■■□□□ 1.76
Rfc4Q99J62 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rfc4Q99J62 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rfc4Q99J62 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.04■■□□□ 1.76
Rfc4Q99J62 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rfc4Q99J62 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Rfc4Q99J62 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rfc4Q99J62 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.03■■□□□ 1.76
Rfc4Q99J62 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rfc4Q99J62 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rfc4Q99J62 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rfc4Q99J62 Gm14117-201ENSMUST00000122417 843 ntBASIC26.02■■□□□ 1.76
Rfc4Q99J62 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC26.02■■□□□ 1.76
Rfc4Q99J62 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Rfc4Q99J62 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC26.01■■□□□ 1.75
Rfc4Q99J62 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rfc4Q99J62 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms