Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cacna1dQ99246 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cacna1dQ99246 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cacna1dQ99246 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cacna1dQ99246 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.56■■□□□ 1.2
Cacna1dQ99246 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cacna1dQ99246 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cacna1dQ99246 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cacna1dQ99246 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cacna1dQ99246 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Cacna1dQ99246 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cacna1dQ99246 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cacna1dQ99246 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cacna1dQ99246 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Cacna1dQ99246 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.52■■□□□ 1.2
Cacna1dQ99246 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cacna1dQ99246 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cacna1dQ99246 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.52■■□□□ 1.2
Cacna1dQ99246 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cacna1dQ99246 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Cacna1dQ99246 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Cacna1dQ99246 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Cacna1dQ99246 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cacna1dQ99246 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cacna1dQ99246 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cacna1dQ99246 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cacna1dQ99246 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cacna1dQ99246 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Cacna1dQ99246 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.49■■□□□ 1.19
Cacna1dQ99246 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.49■■□□□ 1.19
Cacna1dQ99246 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cacna1dQ99246 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cacna1dQ99246 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
Cacna1dQ99246 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.48■■□□□ 1.19
Cacna1dQ99246 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Cacna1dQ99246 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Cacna1dQ99246 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cacna1dQ99246 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Cacna1dQ99246 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cacna1dQ99246 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cacna1dQ99246 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cacna1dQ99246 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
Cacna1dQ99246 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cacna1dQ99246 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cacna1dQ99246 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cacna1dQ99246 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cacna1dQ99246 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cacna1dQ99246 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cacna1dQ99246 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Cacna1dQ99246 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.45■■□□□ 1.18
Cacna1dQ99246 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Cacna1dQ99246 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cacna1dQ99246 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Cacna1dQ99246 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Cacna1dQ99246 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.43■■□□□ 1.18
Cacna1dQ99246 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Cacna1dQ99246 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.43■■□□□ 1.18
Cacna1dQ99246 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Cacna1dQ99246 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cacna1dQ99246 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cacna1dQ99246 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.42■■□□□ 1.18
Cacna1dQ99246 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cacna1dQ99246 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.42■■□□□ 1.18
Cacna1dQ99246 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Cacna1dQ99246 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cacna1dQ99246 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cacna1dQ99246 Gm15546-201ENSMUST00000122095 826 ntBASIC22.41■■□□□ 1.18
Cacna1dQ99246 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cacna1dQ99246 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.41■■□□□ 1.18
Cacna1dQ99246 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cacna1dQ99246 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cacna1dQ99246 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.41■■□□□ 1.18
Cacna1dQ99246 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cacna1dQ99246 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cacna1dQ99246 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cacna1dQ99246 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Cacna1dQ99246 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cacna1dQ99246 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cacna1dQ99246 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cacna1dQ99246 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Cacna1dQ99246 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cacna1dQ99246 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Cacna1dQ99246 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Cacna1dQ99246 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Cacna1dQ99246 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cacna1dQ99246 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.36■■□□□ 1.17
Cacna1dQ99246 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cacna1dQ99246 Gm13238-201ENSMUST00000117655 780 ntBASIC22.36■■□□□ 1.17
Cacna1dQ99246 Gm43566-201ENSMUST00000196851 808 ntBASIC22.36■■□□□ 1.17
Cacna1dQ99246 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cacna1dQ99246 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Cacna1dQ99246 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.35■■□□□ 1.17
Cacna1dQ99246 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
Cacna1dQ99246 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacna1dQ99246 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacna1dQ99246 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.33■■□□□ 1.17
Cacna1dQ99246 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Cacna1dQ99246 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.32■■□□□ 1.16
Cacna1dQ99246 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.32■■□□□ 1.16
Cacna1dQ99246 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.31■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms