Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp1aQ921W0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Chmp1aQ921W0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chmp1aQ921W0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Chmp1aQ921W0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp1aQ921W0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp1aQ921W0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Chmp1aQ921W0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Chmp1aQ921W0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp1aQ921W0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp1aQ921W0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Chmp1aQ921W0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp1aQ921W0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp1aQ921W0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp1aQ921W0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp1aQ921W0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp1aQ921W0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp1aQ921W0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp1aQ921W0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp1aQ921W0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp1aQ921W0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp1aQ921W0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp1aQ921W0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp1aQ921W0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp1aQ921W0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp1aQ921W0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Chmp1aQ921W0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp1aQ921W0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Chmp1aQ921W0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1aQ921W0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1aQ921W0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Chmp1aQ921W0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1aQ921W0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1aQ921W0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1aQ921W0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1aQ921W0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.72■□□□□ 0.75
Chmp1aQ921W0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.72■□□□□ 0.75
Chmp1aQ921W0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Chmp1aQ921W0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp1aQ921W0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.71■□□□□ 0.75
Chmp1aQ921W0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp1aQ921W0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp1aQ921W0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp1aQ921W0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Chmp1aQ921W0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp1aQ921W0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.71■□□□□ 0.75
Chmp1aQ921W0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Chmp1aQ921W0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp1aQ921W0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp1aQ921W0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp1aQ921W0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp1aQ921W0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp1aQ921W0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp1aQ921W0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp1aQ921W0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp1aQ921W0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp1aQ921W0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp1aQ921W0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Chmp1aQ921W0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp1aQ921W0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp1aQ921W0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp1aQ921W0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Chmp1aQ921W0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp1aQ921W0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp1aQ921W0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp1aQ921W0 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.66■□□□□ 0.74
Chmp1aQ921W0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp1aQ921W0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp1aQ921W0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp1aQ921W0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Chmp1aQ921W0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp1aQ921W0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp1aQ921W0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.65■□□□□ 0.74
Chmp1aQ921W0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp1aQ921W0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp1aQ921W0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp1aQ921W0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp1aQ921W0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp1aQ921W0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp1aQ921W0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp1aQ921W0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp1aQ921W0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Chmp1aQ921W0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp1aQ921W0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp1aQ921W0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp1aQ921W0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp1aQ921W0 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 252.7 ms