Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.78■■□□□ 1.08
Pcdha8Q91Y12 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha8Q91Y12 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.78■■□□□ 1.08
Pcdha8Q91Y12 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Pcdha8Q91Y12 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.77■■□□□ 1.08
Pcdha8Q91Y12 Gm45364-201ENSMUST00000210883 159 ntBASIC21.77■■□□□ 1.08
Pcdha8Q91Y12 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Pcdha8Q91Y12 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha8Q91Y12 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha8Q91Y12 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pcdha8Q91Y12 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha8Q91Y12 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha8Q91Y12 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha8Q91Y12 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdha8Q91Y12 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pcdha8Q91Y12 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha8Q91Y12 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.75■■□□□ 1.07
Pcdha8Q91Y12 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdha8Q91Y12 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha8Q91Y12 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Pcdha8Q91Y12 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.74■■□□□ 1.07
Pcdha8Q91Y12 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdha8Q91Y12 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdha8Q91Y12 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha8Q91Y12 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha8Q91Y12 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Pcdha8Q91Y12 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.73■■□□□ 1.07
Pcdha8Q91Y12 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha8Q91Y12 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha8Q91Y12 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdha8Q91Y12 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha8Q91Y12 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha8Q91Y12 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Pcdha8Q91Y12 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdha8Q91Y12 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.72■■□□□ 1.07
Pcdha8Q91Y12 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdha8Q91Y12 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha8Q91Y12 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha8Q91Y12 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.71■■□□□ 1.07
Pcdha8Q91Y12 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha8Q91Y12 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha8Q91Y12 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.71■■□□□ 1.07
Pcdha8Q91Y12 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
Pcdha8Q91Y12 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdha8Q91Y12 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha8Q91Y12 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdha8Q91Y12 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha8Q91Y12 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.69■■□□□ 1.06
Pcdha8Q91Y12 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha8Q91Y12 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdha8Q91Y12 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha8Q91Y12 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha8Q91Y12 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha8Q91Y12 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha8Q91Y12 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha8Q91Y12 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha8Q91Y12 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha8Q91Y12 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha8Q91Y12 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha8Q91Y12 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha8Q91Y12 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.67■■□□□ 1.06
Pcdha8Q91Y12 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha8Q91Y12 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha8Q91Y12 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha8Q91Y12 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha8Q91Y12 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Pcdha8Q91Y12 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha8Q91Y12 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Pcdha8Q91Y12 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha8Q91Y12 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdha8Q91Y12 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdha8Q91Y12 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha8Q91Y12 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.65■■□□□ 1.06
Pcdha8Q91Y12 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha8Q91Y12 Gm6311-201ENSMUST00000073790 878 ntBASIC21.65■■□□□ 1.06
Pcdha8Q91Y12 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdha8Q91Y12 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha8Q91Y12 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Pcdha8Q91Y12 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.64■■□□□ 1.05
Pcdha8Q91Y12 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
Pcdha8Q91Y12 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
Pcdha8Q91Y12 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha8Q91Y12 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha8Q91Y12 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdha8Q91Y12 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha8Q91Y12 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha8Q91Y12 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha8Q91Y12 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha8Q91Y12 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdha8Q91Y12 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.63■■□□□ 1.05
Pcdha8Q91Y12 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha8Q91Y12 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha8Q91Y12 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Pcdha8Q91Y12 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha8Q91Y12 Terc-201ENSMUST00000082862 423 ntBASIC21.62■■□□□ 1.05
Pcdha8Q91Y12 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha8Q91Y12 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha8Q91Y12 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha8Q91Y12 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha8Q91Y12 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms